Os06g0698300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein phosphatase 2C family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0698300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein phosphatase 2C family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.57 | 0.432 | 8.96 | -0.771 | 1.42 | -0.655 | 0.244 | 2.17 | 0.43 | 7.97 | 0.5742 | 4346 | -- | -- |
| 86.93 | 0.434 | 8.91 | -0.43 | 1.62 | -1.49 | 0.148 | -- | 0.465 | 7.4 | 0.1899 | 9170 | -- | -- |
| 84.73 | 0.429 | 8.96 | -0.768 | 1.42 | -0.649 | -- | 2.17 | 0.427 | 7.98 | 0.5115 | 4339 | -- | -- |
| 86.88 | 0.434 | 8.9 | -0.47 | 1.63 | -1.51 | -- | -- | 0.469 | 7.43 | 0.1203 | 9192 | -- | -- |
| 180.88 | 0.63 | 8.91 | -0.0281 | -- | -0.62 | -- | 0.0918 | 0.696 | -- | 0.4799 | 4434 | -- | -- |
| 111.95 | 0.496 | 8.87 | -0.0209 | 1.42 | -- | 0.189 | -- | 0.685 | 8.02 | -- | -- | -- | -- |
| 112.05 | 0.496 | 8.87 | -0.0157 | 1.42 | -- | -- | -- | 0.685 | 8.01 | -- | -- | -- | -- |
| 179.21 | 0.626 | 8.91 | -0.0348 | -- | -0.632 | -- | -- | 0.668 | -- | 0.1069 | 4444 | -- | -- |
| 91.68 | 0.446 | 8.9 | -- | 1.53 | -1.26 | -- | -- | 0.559 | 7.51 | 0.18 | 9103 | -- | -- |
| 222.87 | 0.698 | 8.9 | -0.00189 | -- | -- | -- | -- | 0.703 | -- | -- | -- | -- | -- |
| 112.06 | 0.495 | 8.87 | -- | 1.42 | -- | -- | -- | 0.687 | 8.01 | -- | -- | -- | -- |
| 179.24 | 0.626 | 8.91 | -- | -- | -0.631 | -- | -- | 0.672 | -- | 0.1069 | 4444 | -- | -- |
| 222.87 | 0.697 | 8.9 | -- | -- | -- | -- | -- | 0.703 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.38 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 7 |
| 7 | 83.47 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 9 |
| 21 | 83.62 | radiation | 1 | 4320 | < th | dose dependent | rect. | 15 | 5 |
| 27 | 83.63 | radiation | 1 | 4320 | < th | dose dependent | rect. | 15 | 12 |
| 29 | 83.64 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 40 | 83.68 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 60 | 83.75 | wind | 5 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 72 | 83.83 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 9 |
| 83 | 83.85 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 118 | 84.01 | radiation | 1 | 4320 | < th | dose dependent | sin | 17 | NA |
| 143 | 84.08 | temperature | 10 | 1440 | > th | dose dependent | sin | 21 | NA |
| 167 | 84.12 | radiation | 1 | 4320 | < th | dose dependent | rect. | 8 | 12 |
| 171 | 84.12 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 177 | 84.13 | radiation | 1 | 4320 | < th | dose dependent | rect. | 8 | 16 |
| 178 | 84.13 | radiation | 1 | 4320 | < th | dose dependent | rect. | 8 | 19 |
| 202 | 84.20 | wind | 7 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 216 | 84.22 | humidity | 70 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 217 | 84.22 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 274 | 84.33 | humidity | 60 | 43200 | < th | dose dependent | rect. | 12 | 8 |
| 298 | 84.36 | temperature | 30 | 1440 | < th | dose dependent | sin | 21 | NA |
| 299 | 84.36 | humidity | 60 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 328 | 84.41 | radiation | 1 | 4320 | < th | dose dependent | rect. | 14 | 20 |
| 334 | 84.43 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 3 |
| 336 | 84.43 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 14 |
| 338 | 84.43 | humidity | 60 | 43200 | < th | dose dependent | rect. | 12 | 19 |
| 447 | 84.56 | radiation | 1 | 4320 | > th | dose independent | rect. | 15 | 4 |
| 532 | 84.64 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 544 | 84.65 | wind | 7 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 553 | 84.66 | humidity | 60 | 43200 | < th | dose dependent | sin | 18 | NA |
| 602 | 84.69 | humidity | 60 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 728 | 84.82 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 5 |
| 826 | 84.88 | radiation | 1 | 4320 | < th | dose dependent | rect. | 2 | 17 |
| 851 | 84.89 | humidity | 60 | 43200 | < th | dose dependent | no | NA | NA |
| 852 | 84.89 | radiation | 1 | 4320 | < th | dose dependent | no | NA | NA |
| 918 | 84.92 | radiation | 1 | 4320 | > th | dose independent | sin | 17 | NA |
| 920 | 84.92 | radiation | 1 | 4320 | > th | dose independent | rect. | 8 | 11 |
| 965 | 84.95 | humidity | 60 | 43200 | < th | dose dependent | rect. | 16 | 23 |
| 967 | 84.96 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 3 |
| 968 | 84.96 | radiation | 1 | 4320 | < th | dose independent | rect. | 15 | 4 |
| 989 | 84.98 | radiation | 1 | 4320 | < th | dose independent | rect. | 15 | 12 |