Os06g0695800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
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Os06g0695800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121.18 | 0.517 | 12.1 | -1.24 | 2.73 | -0.723 | 0.394 | 1.83 | -1.18 | 9.49 | 9.984 | 1468 | -- | -- |
| 124.66 | 0.52 | 12.1 | -1.16 | 2.92 | -0.646 | 0.21 | -- | -1.16 | 9.63 | 20 | 1344 | -- | -- |
| 121.73 | 0.514 | 12.1 | -1.23 | 2.73 | -0.719 | -- | 1.78 | -1.18 | 9.51 | 10 | 1465 | -- | -- |
| 124.85 | 0.52 | 12.1 | -1.15 | 2.92 | -0.648 | -- | -- | -1.16 | 9.64 | 20 | 1341 | -- | -- |
| 294.68 | 0.804 | 12.1 | -1.03 | -- | -1.73 | -- | 0.515 | -1.04 | -- | 6.602 | 1595 | -- | -- |
| 137.66 | 0.55 | 12 | -1.06 | 2.79 | -- | 0.133 | -- | -1.01 | 9.55 | -- | -- | -- | -- |
| 137.72 | 0.55 | 12 | -1.06 | 2.79 | -- | -- | -- | -1.01 | 9.55 | -- | -- | -- | -- |
| 275.8 | 0.773 | 12.2 | -0.309 | -- | 3.19 | -- | -- | -0.654 | -- | 2.615 | 1077 | -- | -- |
| 156.11 | 0.582 | 12 | -- | 2.86 | -0.604 | -- | -- | -1 | 9.62 | 10 | 1387 | -- | -- |
| 596.13 | 1.14 | 12.1 | -1.08 | -- | -- | -- | -- | -0.999 | -- | -- | -- | -- | -- |
| 167.25 | 0.605 | 12 | -- | 2.79 | -- | -- | -- | -0.888 | 9.58 | -- | -- | -- | -- |
| 250.36 | 0.737 | 12 | -- | -- | 4.05 | -- | -- | -0.661 | -- | 0.6 | 1078 | -- | -- |
| 626.84 | 1.17 | 12.1 | -- | -- | -- | -- | -- | -0.879 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.86 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 2 | 118.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 6 |
| 7 | 118.48 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 6 |
| 20 | 118.89 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 13 |
| 26 | 119.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 27 | 119.15 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 20 |
| 40 | 119.44 | radiation | 10 | 1440 | < th | dose dependent | sin | 21 | NA |
| 43 | 119.53 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 63 | 119.77 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 67 | 119.82 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 69 | 119.84 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 14 |
| 71 | 119.85 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 10 |
| 129 | 120.34 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 131 | 120.36 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 10 |
| 133 | 120.37 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 6 |
| 137 | 120.37 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 144 | 120.40 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 146 | 120.41 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 149 | 120.47 | radiation | 10 | 1440 | < th | dose independent | sin | 16 | NA |
| 159 | 120.52 | temperature | 20 | 1440 | > th | dose independent | sin | 13 | NA |
| 196 | 120.60 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 201 | 120.63 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 204 | 120.64 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 12 |
| 207 | 120.65 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 219 | 120.69 | radiation | 10 | 1440 | < th | dose dependent | sin | 14 | NA |
| 247 | 120.80 | temperature | 20 | 1440 | < th | dose independent | sin | 12 | NA |
| 256 | 120.83 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 319 | 121.03 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 333 | 121.11 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 15 |
| 336 | 121.12 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 14 |
| 339 | 121.14 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 10 |
| 342 | 121.15 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 7 |
| 343 | 121.15 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 12 |
| 360 | 121.20 | humidity | 60 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 425 | 121.43 | radiation | 10 | 1440 | < th | dose dependent | rect. | 2 | 21 |
| 428 | 121.44 | radiation | 10 | 1440 | < th | dose dependent | rect. | 2 | 18 |
| 431 | 121.44 | radiation | 10 | 1440 | < th | dose dependent | rect. | 21 | 22 |
| 443 | 121.45 | radiation | 10 | 1440 | < th | dose dependent | no | NA | NA |
| 444 | 121.45 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 496 | 121.48 | temperature | 20 | 270 | < th | dose independent | rect. | 12 | 11 |
| 596 | 121.70 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 633 | 121.77 | humidity | 60 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 649 | 121.84 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 663 | 121.89 | temperature | 20 | 270 | > th | dose independent | sin | 19 | NA |
| 701 | 122.00 | temperature | 25 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 709 | 122.02 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 9 |
| 722 | 122.03 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 752 | 122.08 | humidity | 50 | 720 | > th | dose dependent | rect. | 18 | 8 |
| 765 | 122.11 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 19 |
| 770 | 122.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 791 | 122.17 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 806 | 122.19 | temperature | 20 | 90 | > th | dose independent | sin | 13 | NA |
| 886 | 122.27 | humidity | 90 | 720 | > th | dose independent | rect. | 20 | 1 |
| 928 | 122.30 | radiation | 20 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 956 | 122.36 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 967 | 122.39 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 984 | 122.42 | temperature | 20 | 1440 | < th | dose dependent | rect. | 2 | 3 |