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Os06g0694800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.7 (0.0211) R2 : 0.906
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.87 (0.131) R2dC : 0.291 R2C : 0.715
β3 : -1.2 (0.106) R2dE : 0.182 R2E : 0.603
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.293 (0.0443) R2dN8 : 0.0119 R2N8 : 0.00731
σ : 0.392
deviance : 70.69
__
_____
C
peak time of C : 12.8
E
wheather : radiation
threshold : 7.57
memory length : 99
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
68.47 0.389 13.7 -0.289 1.85 -1.2 0.22 0.0178 -0.326 12.8 7.17 99 -- --
68.46 0.385 13.7 -0.289 1.84 -1.21 0.194 -- -0.325 12.8 7.16 101 -- --
68.48 0.385 13.7 -0.291 1.87 -1.19 -- -0.152 -0.325 12.8 7.086 101 -- --
68.61 0.386 13.7 -0.283 1.84 -1.21 -- -- -0.324 12.8 7.025 101 -- --
94.26 0.452 13.7 -0.404 -- -2.57 -- -0.083 -0.406 -- 5.14 120 -- --
88.08 0.44 13.7 -0.278 3.23 -- 0.257 -- -0.254 12.7 -- -- -- --
88.36 0.44 13.7 -0.269 3.23 -- -- -- -0.253 12.7 -- -- -- --
93.97 0.451 13.7 -0.353 -- -2.61 -- -- -0.395 -- 5.095 127 -- --
70.69 0.392 13.7 -- 1.87 -1.2 -- -- -0.293 12.8 7.57 99 -- --
738.93 1.27 13.7 -0.385 -- -- -- -- -0.311 -- -- -- -- --
90.26 0.444 13.7 -- 3.23 -- -- -- -0.223 12.7 -- -- -- --
97.21 0.459 13.7 -- -- -2.61 -- -- -0.352 -- 5.34 127 -- --
742.84 1.27 13.7 -- -- -- -- -- -0.269 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 57.76 radiation 1.0 270 < th dose dependent rect. 23 22
3 58.64 radiation 40.0 270 < th dose dependent rect. 15 14
6 59.61 radiation 1.0 270 < th dose dependent rect. 1 18
7 59.67 radiation 20.0 270 < th dose independent rect. 16 13
9 59.81 radiation 1.0 270 < th dose independent rect. 23 22
11 59.97 temperature 15.0 270 > th dose independent rect. 5 11
12 60.15 precipitation 0.1 270 < th dose independent rect. 5 20
13 60.15 precipitation 0.1 270 < th dose dependent rect. 5 20
15 60.32 precipitation 0.1 270 < th dose independent rect. 5 11
16 60.32 precipitation 0.1 270 < th dose dependent rect. 5 11
19 60.80 wind 9.0 270 < th dose independent rect. 5 11
23 61.12 wind 9.0 270 < th dose independent rect. 16 13
28 61.19 atmosphere 1015.0 270 < th dose independent rect. 5 11
29 61.19 temperature 10.0 270 > th dose independent rect. 16 13
31 61.26 atmosphere 995.0 270 > th dose independent rect. 16 13
36 61.36 radiation 10.0 90 < th dose dependent rect. 3 10
38 61.57 radiation 1.0 270 < th dose dependent rect. 1 4
40 61.59 radiation 10.0 90 < th dose dependent rect. 3 12
42 61.61 atmosphere 1015.0 720 < th dose independent rect. 17 4
44 61.63 radiation 10.0 90 < th dose dependent rect. 3 4
45 61.64 wind 9.0 270 < th dose independent rect. 1 4
46 61.64 temperature 10.0 270 > th dose independent rect. 1 4
48 61.64 temperature 30.0 270 < th dose independent rect. 1 4
49 61.64 humidity 50.0 270 > th dose independent rect. 1 4
52 61.64 atmosphere 995.0 270 > th dose independent rect. 1 4
53 61.64 atmosphere 1010.0 270 < th dose independent rect. 1 4
55 61.64 radiation 1.0 270 < th dose independent rect. 1 4
60 61.64 temperature 10.0 270 > th dose independent rect. 5 20
67 61.67 wind 9.0 270 < th dose independent rect. 5 20
69 61.71 atmosphere 995.0 720 > th dose independent rect. 17 4
73 61.75 precipitation 0.1 270 < th dose independent rect. 1 4
75 61.75 precipitation 0.1 270 < th dose dependent rect. 1 4
78 61.85 atmosphere 995.0 720 > th dose independent rect. 17 20
81 61.90 radiation 1.0 270 < th dose dependent rect. 1 6
90 61.97 atmosphere 995.0 270 > th dose dependent rect. 1 4
92 61.98 wind 1.0 270 > th dose independent rect. 1 4
102 62.27 precipitation 0.1 720 < th dose independent rect. 13 4
103 62.27 precipitation 0.1 720 < th dose dependent rect. 13 4
107 62.32 temperature 15.0 720 > th dose independent rect. 5 4
112 62.37 radiation 1.0 270 < th dose independent rect. 1 16
113 62.48 atmosphere 1000.0 90 > th dose independent rect. 3 3
123 62.62 atmosphere 995.0 90 > th dose dependent rect. 3 3
131 62.73 precipitation 0.1 90 < th dose independent rect. 3 3
132 62.73 precipitation 0.1 90 < th dose dependent rect. 3 3
137 62.76 temperature 25.0 90 < th dose independent rect. 3 4
138 62.76 atmosphere 1015.0 1440 < th dose independent rect. 3 4
139 62.78 radiation 20.0 720 < th dose independent rect. 17 4
141 62.80 wind 9.0 270 < th dose dependent rect. 1 4
145 62.84 temperature 30.0 270 < th dose independent rect. 20 13
148 62.87 wind 7.0 90 < th dose independent rect. 3 3
150 62.88 radiation 10.0 90 < th dose independent rect. 3 3
153 62.89 temperature 10.0 90 > th dose independent rect. 3 3
156 62.89 humidity 50.0 90 > th dose independent rect. 3 3
160 62.89 atmosphere 1010.0 90 < th dose independent rect. 3 3
173 62.94 radiation 1.0 90 < th dose independent rect. 3 14
174 62.94 humidity 50.0 270 > th dose dependent rect. 1 4
210 63.03 temperature 10.0 720 > th dose independent rect. 17 4
213 63.03 temperature 10.0 720 > th dose independent rect. 21 20
214 63.03 radiation 1.0 90 < th dose dependent sin 2 NA
222 63.06 precipitation 0.1 270 < th dose independent rect. 20 13
223 63.06 precipitation 0.1 270 < th dose dependent rect. 20 13
224 63.08 temperature 10.0 270 > th dose independent rect. 9 11
225 63.08 atmosphere 1015.0 270 < th dose independent rect. 9 11
226 63.08 temperature 10.0 270 > th dose independent rect. 20 13
227 63.08 humidity 50.0 270 > th dose independent rect. 20 13
228 63.08 atmosphere 995.0 270 > th dose independent rect. 20 13
232 63.09 wind 9.0 270 < th dose independent rect. 20 13
239 63.14 radiation 20.0 10 < th dose dependent rect. 2 6
241 63.16 wind 7.0 720 < th dose independent rect. 5 4
242 63.16 precipitation 0.1 720 < th dose independent rect. 4 14
243 63.16 precipitation 0.1 720 < th dose dependent rect. 4 14
265 63.28 wind 9.0 720 < th dose independent rect. 17 4
271 63.32 precipitation 0.1 720 < th dose independent rect. 5 4
274 63.32 precipitation 0.1 720 < th dose dependent rect. 5 4
284 63.37 humidity 50.0 720 > th dose independent rect. 5 4
285 63.37 atmosphere 995.0 720 > th dose independent rect. 5 4
286 63.37 atmosphere 1015.0 720 < th dose independent rect. 5 4
288 63.37 temperature 10.0 720 > th dose independent rect. 9 20
307 63.43 precipitation 0.1 270 < th dose independent rect. 13 12
314 63.43 precipitation 0.1 270 < th dose dependent rect. 13 12
332 63.46 temperature 10.0 720 > th dose independent rect. 13 4
333 63.46 atmosphere 1015.0 720 < th dose independent rect. 13 4
336 63.46 temperature 10.0 720 > th dose independent rect. 17 20
337 63.46 radiation 40.0 720 < th dose dependent rect. 17 4
397 63.66 precipitation 0.1 720 < th dose independent rect. 12 6
398 63.66 precipitation 0.1 720 < th dose dependent rect. 12 6
437 63.76 precipitation 0.1 720 < th dose independent rect. 21 20
438 63.76 precipitation 0.1 720 < th dose dependent rect. 21 20
442 63.78 radiation 1.0 90 < th dose independent sin 2 NA
465 63.80 wind 1.0 270 > th dose independent rect. 9 11
478 63.83 radiation 10.0 10 < th dose independent rect. 2 6
479 63.83 temperature 30.0 270 < th dose dependent rect. 1 4
485 63.85 wind 9.0 10 < th dose independent rect. 6 20
518 63.92 wind 9.0 1440 < th dose independent rect. 3 4
519 63.92 temperature 10.0 1440 > th dose independent rect. 3 4
522 63.92 temperature 30.0 1440 < th dose independent rect. 3 4
526 63.92 humidity 50.0 1440 > th dose independent rect. 3 4
531 63.92 atmosphere 995.0 1440 > th dose independent rect. 3 4
532 63.92 radiation 40.0 1440 < th dose independent rect. 3 4
536 63.92 temperature 10.0 1440 > th dose independent rect. 7 20
562 63.96 humidity 50.0 90 > th dose dependent rect. 3 3
579 64.02 radiation 40.0 720 < th dose independent rect. 5 4
583 64.03 atmosphere 995.0 270 > th dose independent rect. 9 11
592 64.08 temperature 10.0 270 > th dose independent rect. 1 12
593 64.08 temperature 10.0 270 > th dose independent rect. 13 12
594 64.08 atmosphere 995.0 270 > th dose independent rect. 1 12
595 64.08 atmosphere 1015.0 270 < th dose independent rect. 1 12
597 64.10 radiation 1.0 270 > th dose independent rect. 4 13
612 64.12 atmosphere 995.0 720 > th dose independent rect. 18 10
665 64.23 wind 9.0 720 < th dose independent rect. 17 20
677 64.27 wind 9.0 270 < th dose independent rect. 13 12
733 64.36 wind 9.0 720 < th dose independent rect. 13 4
796 64.43 temperature 30.0 720 < th dose independent rect. 5 4
827 64.58 wind 9.0 270 < th dose independent rect. 1 12
828 64.58 temperature 30.0 90 < th dose dependent rect. 3 3
915 64.73 wind 9.0 720 < th dose independent rect. 21 20
922 64.76 radiation 1.0 720 > th dose independent rect. 13 4
944 64.84 wind 9.0 270 < th dose independent rect. 9 11
947 64.85 radiation 40.0 270 < th dose independent rect. 20 13
976 64.97 temperature 10.0 270 > th dose dependent rect. 1 4
984 65.00 wind 9.0 720 < th dose independent rect. 9 20