Os06g0694300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tetratricopeptide-like helical domain containing protein.
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Os06g0694300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Tetratricopeptide-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 109.56 | 0.492 | 2.96 | 0.428 | 0.404 | -0.265 | 1.01 | 5.29 | 0.142 | 15.9 | 0.1086 | 9 | -- | -- |
| 116.54 | 0.503 | 2.98 | 0.416 | 0.427 | 0.792 | 0.878 | -- | 0.168 | 16.3 | 1.108e-05 | 7 | -- | -- |
| 112.48 | 0.494 | 2.97 | 0.413 | 0.403 | -0.254 | -- | 5.04 | 0.134 | 16 | 0.09637 | 8 | -- | -- |
| 118.28 | 0.507 | 2.98 | 0.414 | 0.439 | 0.822 | -- | -- | 0.159 | 16.2 | 0.3967 | 8 | -- | -- |
| 121.16 | 0.513 | 2.95 | 0.431 | -- | -0.519 | -- | 5.21 | 0.15 | -- | 0.0301 | 8 | -- | -- |
| 120.48 | 0.515 | 2.98 | 0.445 | 0.381 | -- | 0.736 | -- | 0.138 | 16.5 | -- | -- | -- | -- |
| 121.94 | 0.517 | 2.98 | 0.451 | 0.385 | -- | -- | -- | 0.142 | 16.4 | -- | -- | -- | -- |
| 126.82 | 0.525 | 2.97 | 0.504 | -- | -0.309 | -- | -- | 0.139 | -- | 6 | 4 | -- | -- |
| 122.68 | 0.516 | 2.99 | -- | 0.431 | 0.922 | -- | -- | 0.118 | 16.2 | 0.1135 | 8 | -- | -- |
| 129.9 | 0.533 | 2.98 | 0.436 | -- | -- | -- | -- | 0.132 | -- | -- | -- | -- | -- |
| 127.3 | 0.528 | 2.99 | -- | 0.377 | -- | -- | -- | 0.0915 | 16.4 | -- | -- | -- | -- |
| 132.41 | 0.536 | 2.99 | -- | -- | 0.662 | -- | -- | 0.0997 | -- | 0.05471 | 8 | -- | -- |
| 134.91 | 0.542 | 2.99 | -- | -- | -- | -- | -- | 0.0832 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.19 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 5 | 102.43 | humidity | 90.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 6 | 102.48 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 7 | 102.50 | wind | 5.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 8 | 102.50 | wind | 7.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 10 | 102.50 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 14 | 102.54 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 16 | 102.54 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 17 | 102.54 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 21 | 102.54 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 22 | 102.54 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 24 | 102.54 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 29 | 102.54 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 30 | 102.54 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 35 | 102.55 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 36 | 102.55 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 39 | 102.55 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 43 | 102.55 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 53 | 102.55 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 54 | 102.55 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 74 | 102.55 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 82 | 102.56 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 85 | 102.59 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 90 | 102.64 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 94 | 102.70 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 95 | 102.71 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 96 | 102.71 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 99 | 103.02 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 102 | 103.32 | wind | 1.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 104 | 103.41 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 169 | 106.50 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 188 | 107.24 | wind | 1.0 | 10 | < th | dose dependent | rect. | 15 | 10 |
| 235 | 108.24 | wind | 1.0 | 30 | < th | dose independent | rect. | 15 | 10 |
| 246 | 108.31 | wind | 1.0 | 30 | < th | dose independent | rect. | 17 | 8 |
| 259 | 108.40 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 23 |
| 260 | 108.40 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 379 | 109.39 | wind | 1.0 | 10 | < th | dose dependent | sin | 15 | NA |
| 399 | 109.58 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 10 | 5 |
| 407 | 109.67 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 11 | 4 |
| 421 | 109.78 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 446 | 110.06 | wind | 1.0 | 30 | < th | dose independent | sin | 14 | NA |
| 525 | 110.56 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 11 | 1 |
| 571 | 110.85 | wind | 1.0 | 30 | < th | dose dependent | rect. | 22 | 15 |
| 598 | 110.94 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 10 | 5 |
| 610 | 111.02 | wind | 1.0 | 10 | < th | dose dependent | rect. | 2 | 23 |
| 619 | 111.07 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 10 | 2 |
| 734 | 111.40 | wind | 1.0 | 10 | < th | dose dependent | rect. | 15 | 22 |
| 816 | 111.61 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 828 | 111.63 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 8 | 14 |
| 853 | 111.72 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 11 | 5 |