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Os06g0693500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, C2H2-type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0191) R2 : 0.574
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.21 (0.0486) R2dC : 0.575 R2C : 0.574
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0141 (0.0403) R2dN8 : 0.000149 R2N8 : -0.000669
σ : 0.361
deviance : 59.48
__
_____
C
peak time of C : 15.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
49.64 0.331 11.2 0.426 1.06 -0.361 0.0263 -0.0957 0.059 16.7 17.76 19 -- --
49.69 0.328 11.2 0.429 1.06 -0.361 0.0645 -- 0.0597 16.7 17.77 18 -- --
49.64 0.328 11.2 0.426 1.06 -0.359 -- -0.1 0.0593 16.7 17.77 18 -- --
49.7 0.328 11.2 0.432 1.06 -0.361 -- -- 0.06 16.7 17.77 18 -- --
71.49 0.394 11.2 0.606 -- -0.852 -- 0.179 0.351 -- 1.2 410 -- --
54.15 0.345 11.2 0.45 1.21 -- -0.00423 -- 0.0643 15.8 -- -- -- --
54.15 0.345 11.2 0.45 1.21 -- -- -- 0.0642 15.8 -- -- -- --
55.77 0.348 11.2 0.345 -- -1.12 -- -- 0.016 -- 0.01002 478 -- --
54.64 0.344 11.2 -- 1.04 -0.364 -- -- 0.0322 16.7 17.7 19 -- --
135.47 0.544 11.2 0.399 -- -- -- -- 0.0318 -- -- -- -- --
59.48 0.361 11.2 -- 1.21 -- -- -- 0.0141 15.8 -- -- -- --
58.75 0.357 11.2 -- -- -1.12 -- -- 0.0171 -- 0.009999 478 -- --
139.67 0.552 11.2 -- -- -- -- -- -0.0125 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 39.82 temperature 30.0 270 < th dose dependent rect. 3 2
2 39.83 temperature 30.0 90 < th dose dependent rect. 3 5
4 40.29 temperature 10.0 90 > th dose dependent rect. 8 19
5 40.76 temperature 10.0 10 > th dose dependent rect. 8 19
12 41.16 wind 5.0 90 < th dose independent rect. 3 5
13 41.18 wind 9.0 90 < th dose independent rect. 8 19
14 41.27 precipitation 0.1 90 < th dose independent rect. 3 5
15 41.27 precipitation 0.1 90 < th dose dependent rect. 3 5
16 41.29 wind 9.0 270 < th dose independent rect. 5 22
21 41.43 wind 9.0 270 < th dose independent rect. 6 20
23 41.45 temperature 10.0 90 > th dose independent rect. 3 5
25 41.45 temperature 30.0 90 < th dose independent rect. 3 5
26 41.45 humidity 50.0 90 > th dose independent rect. 3 5
28 41.45 atmosphere 995.0 90 > th dose independent rect. 3 5
29 41.45 atmosphere 1015.0 90 < th dose independent rect. 3 5
30 41.45 temperature 10.0 90 > th dose independent rect. 8 19
31 41.48 temperature 10.0 270 > th dose dependent rect. 6 6
32 41.51 temperature 25.0 270 < th dose independent rect. 3 2
33 41.52 wind 5.0 270 < th dose independent rect. 3 2
34 41.52 radiation 40.0 90 < th dose independent rect. 3 5
37 41.56 temperature 10.0 270 > th dose dependent rect. 20 15
42 41.66 precipitation 0.1 270 < th dose independent rect. 3 2
44 41.66 precipitation 0.1 270 < th dose dependent rect. 3 2
45 41.68 temperature 30.0 90 < th dose dependent rect. 3 8
49 41.72 precipitation 0.1 90 < th dose independent rect. 8 19
50 41.72 precipitation 0.1 90 < th dose dependent rect. 8 19
54 41.84 temperature 10.0 270 > th dose independent rect. 3 2
57 41.84 humidity 50.0 270 > th dose independent rect. 3 2
60 41.84 atmosphere 995.0 270 > th dose independent rect. 3 2
61 41.84 atmosphere 1010.0 270 < th dose independent rect. 3 2
63 41.84 radiation 20.0 270 < th dose independent rect. 3 2
78 41.84 temperature 10.0 270 > th dose independent rect. 6 20
80 41.84 temperature 10.0 270 > th dose independent rect. 5 22
82 41.85 radiation 1.0 270 < th dose dependent rect. 3 2
83 41.85 wind 9.0 270 < th dose dependent rect. 6 7
85 41.86 radiation 30.0 270 < th dose dependent rect. 3 2
89 41.90 radiation 40.0 270 < th dose dependent rect. 2 4
91 41.92 radiation 1.0 270 < th dose independent rect. 3 2
94 41.93 temperature 10.0 90 > th dose dependent rect. 8 6
101 42.01 temperature 15.0 270 > th dose independent rect. 14 16
103 42.03 wind 9.0 90 < th dose dependent rect. 8 19
105 42.10 temperature 10.0 270 > th dose dependent rect. 8 2
108 42.13 precipitation 0.1 270 < th dose independent rect. 6 20
109 42.13 precipitation 0.1 270 < th dose dependent rect. 6 20
117 42.20 wind 9.0 90 < th dose dependent rect. 3 5
124 42.25 temperature 25.0 270 < th dose independent rect. 1 7
126 42.26 wind 1.0 270 > th dose independent rect. 2 4
128 42.28 precipitation 0.1 10 < th dose independent rect. 3 6
129 42.28 precipitation 0.1 10 < th dose dependent rect. 3 6
130 42.28 wind 9.0 270 < th dose dependent rect. 6 20
148 42.31 temperature 10.0 10 > th dose dependent rect. 8 6
149 42.32 wind 9.0 10 < th dose independent rect. 9 18
158 42.37 wind 7.0 10 < th dose independent rect. 3 6
173 42.44 radiation 1.0 270 < th dose independent rect. 2 8
188 42.49 wind 9.0 270 < th dose dependent rect. 3 2
211 42.56 temperature 10.0 10 > th dose independent rect. 3 6
213 42.56 temperature 30.0 10 < th dose independent rect. 3 6
214 42.56 humidity 50.0 10 > th dose independent rect. 3 6
216 42.56 atmosphere 995.0 10 > th dose independent rect. 3 6
217 42.56 atmosphere 1015.0 10 < th dose independent rect. 3 6
218 42.56 temperature 10.0 10 > th dose independent rect. 9 18
229 42.59 precipitation 0.1 10 < th dose independent rect. 9 18
231 42.59 temperature 30.0 90 < th dose dependent rect. 3 16
233 42.59 precipitation 0.1 10 < th dose dependent rect. 9 18
248 42.62 wind 7.0 270 < th dose independent rect. 6 8
262 42.66 precipitation 0.1 270 < th dose independent rect. 5 22
265 42.66 precipitation 0.1 270 < th dose dependent rect. 5 22
286 42.69 temperature 15.0 10 > th dose independent rect. 14 18
294 42.70 temperature 30.0 90 < th dose dependent rect. 3 14
312 42.74 atmosphere 995.0 90 > th dose independent rect. 8 19
348 42.83 wind 9.0 270 < th dose independent rect. 17 9
353 42.84 precipitation 0.1 270 < th dose independent rect. 6 8
354 42.84 precipitation 0.1 270 < th dose dependent rect. 6 8
379 42.89 humidity 50.0 270 > th dose independent rect. 6 7
386 42.93 atmosphere 995.0 270 > th dose independent rect. 2 15
390 42.94 temperature 10.0 270 > th dose independent rect. 17 9
391 42.94 radiation 20.0 270 < th dose independent rect. 17 9
394 42.94 temperature 10.0 270 > th dose independent rect. 2 15
395 42.94 atmosphere 1015.0 270 < th dose independent rect. 2 15
422 43.00 temperature 10.0 270 > th dose independent rect. 6 8
423 43.00 atmosphere 995.0 270 > th dose independent rect. 6 8
424 43.00 atmosphere 1015.0 270 < th dose independent rect. 6 8
426 43.00 precipitation 0.1 270 < th dose independent rect. 2 15
431 43.00 precipitation 0.1 270 < th dose dependent rect. 2 15
433 43.01 precipitation 0.1 270 < th dose independent rect. 14 16
437 43.01 precipitation 0.1 270 < th dose dependent rect. 14 16
438 43.02 humidity 50.0 270 > th dose dependent rect. 3 2
454 43.07 wind 1.0 270 > th dose independent rect. 3 2
460 43.07 atmosphere 1015.0 90 < th dose independent rect. 8 19
466 43.09 wind 9.0 10 < th dose dependent rect. 3 6
467 43.10 wind 9.0 1440 < th dose independent rect. 4 5
468 43.10 temperature 10.0 1440 > th dose independent rect. 4 5
471 43.10 humidity 50.0 1440 > th dose independent rect. 4 5
473 43.10 atmosphere 995.0 1440 > th dose independent rect. 4 5
474 43.10 atmosphere 1015.0 1440 < th dose independent rect. 4 5
475 43.10 radiation 1.0 270 > th dose independent rect. 6 7
478 43.10 temperature 10.0 1440 > th dose independent rect. 9 19
482 43.10 radiation 40.0 270 < th dose dependent rect. 17 9
485 43.11 atmosphere 995.0 270 > th dose independent rect. 13 17
492 43.13 radiation 40.0 270 < th dose independent rect. 14 16
557 43.24 precipitation 0.1 270 < th dose independent rect. 17 9
560 43.24 precipitation 0.1 270 < th dose dependent rect. 17 9
566 43.28 atmosphere 995.0 90 > th dose dependent rect. 3 5
570 43.29 humidity 50.0 90 > th dose dependent rect. 3 5
574 43.31 wind 9.0 90 < th dose independent rect. 8 6
577 43.32 precipitation 0.1 90 < th dose independent rect. 8 6
578 43.32 wind 9.0 270 < th dose independent rect. 14 16
579 43.32 precipitation 0.1 90 < th dose dependent rect. 8 6
581 43.34 humidity 50.0 270 > th dose independent rect. 17 9
592 43.38 temperature 30.0 90 < th dose dependent rect. 3 12
599 43.41 radiation 40.0 90 < th dose independent rect. 3 16
616 43.45 temperature 10.0 90 > th dose independent rect. 8 6
617 43.45 atmosphere 995.0 90 > th dose independent rect. 8 6
618 43.45 atmosphere 1015.0 90 < th dose independent rect. 8 6
629 43.48 wind 9.0 270 < th dose dependent rect. 7 4
649 43.52 temperature 30.0 90 < th dose independent rect. 3 16
650 43.52 atmosphere 1015.0 270 < th dose dependent rect. 3 2
655 43.53 wind 9.0 270 < th dose independent rect. 2 15
657 43.54 temperature 15.0 10 > th dose independent rect. 16 16
664 43.55 radiation 40.0 90 < th dose independent rect. 14 18
665 43.55 wind 9.0 270 < th dose dependent rect. 8 2
674 43.57 atmosphere 995.0 270 > th dose independent rect. 17 9
716 43.65 humidity 50.0 90 > th dose independent rect. 8 6
717 43.65 radiation 1.0 90 > th dose independent rect. 8 6
730 43.66 atmosphere 995.0 10 > th dose independent rect. 9 18
755 43.69 radiation 1.0 270 < th dose independent sin 3 NA
771 43.71 wind 9.0 10 < th dose independent rect. 8 6
811 43.78 humidity 90.0 90 < th dose independent rect. 8 6
815 43.78 atmosphere 995.0 10 > th dose independent rect. 14 18
829 43.80 atmosphere 995.0 270 > th dose independent rect. 6 20
831 43.81 temperature 10.0 10 > th dose independent rect. 8 6
833 43.81 atmosphere 995.0 10 > th dose independent rect. 8 6
834 43.81 atmosphere 1015.0 10 < th dose independent rect. 8 6
835 43.81 precipitation 0.1 10 < th dose independent rect. 8 6
838 43.81 precipitation 0.1 10 < th dose dependent rect. 8 6
858 43.85 precipitation 0.1 10 < th dose independent rect. 14 18
862 43.85 precipitation 0.1 10 < th dose dependent rect. 14 18
867 43.87 wind 5.0 270 < th dose independent rect. 8 2
896 43.90 atmosphere 1015.0 10 < th dose independent rect. 9 18
911 43.92 wind 1.0 90 > th dose independent rect. 8 6
912 43.92 wind 1.0 90 > th dose independent rect. 8 19
915 43.93 radiation 1.0 10 > th dose independent rect. 8 6
932 43.96 radiation 1.0 270 < th dose dependent sin 3 NA
951 43.99 temperature 10.0 1440 > th dose independent rect. 9 6
955 43.99 temperature 10.0 1440 > th dose independent rect. 15 18
964 44.00 radiation 40.0 90 < th dose dependent rect. 3 8
966 44.01 radiation 1.0 270 > th dose independent sin 4 NA
974 44.02 wind 1.0 270 > th dose independent rect. 13 17
983 44.03 humidity 50.0 90 > th dose independent rect. 8 19
988 44.04 humidity 50.0 10 > th dose independent rect. 14 18