Os06g0693400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0693400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.55 | 0.424 | 7.79 | -0.42 | 0.714 | 1.47 | -0.664 | 0.394 | -0.0117 | 23.5 | 10.09 | 94 | -- | -- |
| 81.65 | 0.421 | 7.8 | -0.479 | 0.713 | 1.48 | -0.738 | -- | -0.0278 | 23.5 | 12.62 | 94 | -- | -- |
| 83.04 | 0.424 | 7.78 | -0.296 | 0.734 | 1.44 | -- | 1.04 | 0.0189 | 23.2 | 8.747 | 72 | -- | -- |
| 83.89 | 0.427 | 7.8 | -0.442 | 0.727 | 1.46 | -- | -- | -0.0214 | 23.2 | 13.25 | 79 | -- | -- |
| 95.15 | 0.454 | 7.81 | -0.687 | -- | 1.31 | -- | -1.16 | -0.0897 | -- | 16.44 | 641 | -- | -- |
| 104.29 | 0.479 | 7.75 | -0.16 | 0.602 | -- | -0.371 | -- | 0.182 | 21.2 | -- | -- | -- | -- |
| 104.68 | 0.479 | 7.75 | -0.145 | 0.609 | -- | -- | -- | 0.184 | 20.9 | -- | -- | -- | -- |
| 96.18 | 0.457 | 7.78 | -0.465 | -- | 1.3 | -- | -- | -0.0243 | -- | 15.9 | 608 | -- | -- |
| 88.53 | 0.438 | 7.78 | -- | 0.693 | 1.24 | -- | -- | 0.0539 | 22.9 | 13.76 | 78 | -- | -- |
| 125.87 | 0.524 | 7.74 | -0.144 | -- | -- | -- | -- | 0.18 | -- | -- | -- | -- | -- |
| 105.23 | 0.48 | 7.75 | -- | 0.609 | -- | -- | -- | 0.2 | 20.9 | -- | -- | -- | -- |
| 101.35 | 0.469 | 7.77 | -- | -- | 1.12 | -- | -- | 0.049 | -- | 16.5 | 588 | -- | -- |
| 126.42 | 0.525 | 7.73 | -- | -- | -- | -- | -- | 0.196 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.63 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 4 | 80.46 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 6 | 80.76 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 11 | 80.96 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 15 | 81.06 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 18 | 81.34 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 19 | 81.36 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 20 | 81.38 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 25 | 81.46 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 26 | 81.50 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 31 | 81.56 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 34 | 81.58 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 35 | 81.63 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 63 | 82.04 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 67 | 82.07 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 72 | 82.13 | temperature | 15 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 86 | 82.28 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 108 | 82.60 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 137 | 82.92 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 3 |
| 175 | 83.28 | temperature | 15 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 201 | 83.47 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 208 | 83.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 224 | 83.65 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 6 |
| 228 | 83.67 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 239 | 83.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 260 | 83.84 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 285 | 83.96 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 290 | 83.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 16 |
| 300 | 84.03 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 330 | 84.15 | temperature | 20 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 341 | 84.19 | temperature | 20 | 1440 | > th | dose independent | sin | 12 | NA |
| 423 | 84.43 | temperature | 20 | 1440 | < th | dose independent | sin | 12 | NA |
| 511 | 84.64 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 518 | 84.65 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 545 | 84.74 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 552 | 84.75 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 556 | 84.76 | temperature | 10 | 270 | > th | dose dependent | sin | 9 | NA |
| 557 | 84.76 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 616 | 84.91 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 660 | 85.00 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 670 | 85.01 | temperature | 20 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 692 | 85.08 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 717 | 85.13 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 737 | 85.15 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 745 | 85.17 | wind | 9 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 757 | 85.18 | wind | 9 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 768 | 85.19 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 772 | 85.21 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 4 |
| 847 | 85.32 | wind | 7 | 43200 | < th | dose dependent | rect. | 23 | 4 |
| 867 | 85.37 | wind | 9 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 907 | 85.43 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 4 |
| 943 | 85.49 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 946 | 85.49 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 959 | 85.51 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 995 | 85.56 | temperature | 10 | 720 | > th | dose dependent | sin | 12 | NA |
| 996 | 85.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 15 |