Os06g0692500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
FiT-DB / Search/ Help/ Sample detail
|
Os06g0692500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description :
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 114.2 | 0.502 | 3.01 | 0.0872 | 0.214 | 0.316 | -0.845 | -1.35 | 0.255 | 12.2 | 0.04984 | 133 | -- | -- |
| 115.59 | 0.501 | 3.01 | 0.0772 | 0.237 | 0.309 | 0.657 | -- | 0.276 | 12.4 | 0.01739 | 124 | -- | -- |
| 114.6 | 0.499 | 3.01 | 0.0801 | 0.209 | 0.31 | -- | -0.646 | 0.256 | 12.3 | 0.04001 | 129 | -- | -- |
| 117.15 | 0.504 | 3.01 | 0.0531 | 0.217 | 0.313 | -- | -- | 0.254 | 13 | 0.009938 | 137 | -- | -- |
| 115.04 | 0.5 | 3.02 | 0.00303 | -- | 0.157 | -- | -0.615 | 0.224 | -- | 0.04998 | 127 | -- | -- |
| 116.8 | 0.507 | 3.03 | -0.0302 | 0.143 | -- | -0.642 | -- | 0.211 | 1.1 | -- | -- | -- | -- |
| 118.51 | 0.51 | 3.03 | -0.00721 | 0.144 | -- | -- | -- | 0.214 | 0.989 | -- | -- | -- | -- |
| 117.56 | 0.505 | 3.02 | 0.00489 | -- | 0.153 | -- | -- | 0.228 | -- | 1.567e-05 | 126 | -- | -- |
| 117.12 | 0.504 | 3.02 | -- | 0.236 | 0.319 | -- | -- | 0.239 | 12.9 | 0.009719 | 132 | -- | -- |
| 119.8 | 0.511 | 3.02 | -0.00182 | -- | -- | -- | -- | 0.217 | -- | -- | -- | -- | -- |
| 118.51 | 0.509 | 3.03 | -- | 0.144 | -- | -- | -- | 0.215 | 0.987 | -- | -- | -- | -- |
| 117.56 | 0.505 | 3.02 | -- | -- | 0.152 | -- | -- | 0.225 | -- | 0.009913 | 126 | -- | -- |
| 119.8 | 0.511 | 3.02 | -- | -- | -- | -- | -- | 0.217 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.80 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 3 |
| 2 | 100.65 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 20 | 3 |
| 14 | 104.16 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 16 | 104.22 | temperature | 25.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 19 | 104.24 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 20 | 104.24 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 23 | 104.24 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 27 | 104.24 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 37 | 104.24 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 38 | 104.24 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 58 | 104.24 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 61 | 104.24 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 68 | 104.28 | wind | 3.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 70 | 104.29 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 75 | 104.37 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 76 | 104.38 | humidity | 80.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 78 | 104.42 | wind | 5.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 81 | 104.47 | humidity | 90.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 86 | 104.52 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 90 | 104.59 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 91 | 104.59 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 92 | 104.59 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 95 | 104.60 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 97 | 104.60 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 98 | 104.60 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 101 | 104.60 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 103 | 104.60 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 105 | 104.60 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 110 | 104.60 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 111 | 104.60 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 112 | 104.60 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 125 | 104.84 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 129 | 104.93 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 134 | 105.14 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 20 | 9 |
| 135 | 105.18 | wind | 1.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 141 | 105.27 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 147 | 105.41 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 3 |
| 158 | 105.60 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 168 | 105.82 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 19 | 1 |
| 196 | 105.91 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 200 | 106.02 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 23 |
| 201 | 106.02 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 209 | 106.31 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 9 |
| 213 | 106.43 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 273 | 107.80 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 274 | 107.80 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 310 | 108.57 | radiation | 20.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 325 | 108.72 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 326 | 108.72 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 327 | 108.72 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 331 | 108.73 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 335 | 108.74 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 338 | 108.75 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 339 | 108.75 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 344 | 108.76 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 347 | 108.76 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 351 | 108.76 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 357 | 108.76 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 358 | 108.76 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 378 | 108.76 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 381 | 108.77 | wind | 1.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 383 | 108.77 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 385 | 108.77 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 386 | 108.77 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 389 | 108.77 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 391 | 108.77 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 393 | 108.77 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 398 | 108.77 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 399 | 108.77 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 400 | 108.77 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 405 | 108.77 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 406 | 108.78 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 410 | 108.81 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 415 | 108.89 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 420 | 108.93 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 421 | 108.94 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 444 | 109.33 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 448 | 109.39 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 3 |
| 459 | 109.60 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 3 |
| 502 | 109.81 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 542 | 110.18 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 3 |
| 572 | 110.47 | wind | 5.0 | 30 | < th | dose dependent | rect. | 20 | 3 |
| 587 | 110.71 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 3 |
| 593 | 110.75 | temperature | 30.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 652 | 111.27 | temperature | 25.0 | 270 | > th | dose independent | sin | 13 | NA |
| 668 | 111.43 | temperature | 25.0 | 270 | < th | dose independent | sin | 13 | NA |
| 669 | 111.43 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 714 | 111.80 | temperature | 25.0 | 90 | < th | dose independent | rect. | 17 | 9 |
| 715 | 111.80 | temperature | 25.0 | 270 | < th | dose independent | rect. | 18 | 13 |
| 729 | 111.87 | temperature | 25.0 | 10 | < th | dose independent | rect. | 16 | 10 |
| 732 | 111.88 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 739 | 111.90 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 746 | 111.94 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 21 | 23 |
| 747 | 111.94 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 755 | 111.98 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 23 | 21 |
| 762 | 112.00 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 766 | 112.03 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 21 | 3 |
| 770 | 112.04 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 3 |
| 773 | 112.04 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 3 |
| 777 | 112.04 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 3 |
| 783 | 112.04 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 3 |
| 784 | 112.04 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 3 |
| 804 | 112.04 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 21 |
| 818 | 112.05 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 21 |
| 832 | 112.10 | wind | 1.0 | 30 | > th | dose independent | rect. | 20 | 3 |
| 839 | 112.11 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 864 | 112.19 | temperature | 25.0 | 90 | < th | dose independent | rect. | 19 | 7 |
| 869 | 112.21 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 3 |
| 871 | 112.21 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 3 |
| 872 | 112.21 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 3 |
| 876 | 112.21 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 3 |
| 878 | 112.21 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 3 |
| 883 | 112.21 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 3 |
| 885 | 112.21 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 21 |
| 886 | 112.21 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 3 |
| 891 | 112.21 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 3 |
| 910 | 112.28 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 21 |
| 912 | 112.28 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 21 |
| 961 | 112.47 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 21 | 3 |
| 963 | 112.47 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 21 | 3 |
| 966 | 112.48 | wind | 9.0 | 720 | < th | dose independent | rect. | 3 | 8 |
| 971 | 112.50 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 3 |
| 994 | 112.53 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 21 |