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Os06g0691800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.87 (0.0255) R2 : 0.835
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.16 (0.0659) R2dC : 0.836 R2C : 0.835
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0465 (0.0537) R2dN8 : 0.00035 R2N8 : -0.000244
σ : 0.481
deviance : 105.65
__
_____
C
peak time of C : 4.54
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
90.28 0.446 9.83 0.263 2.83 -0.758 0.895 0.823 0.141 5.61 1.41 89 -- --
94.28 0.452 9.83 0.266 2.81 -0.766 0.734 -- 0.147 5.62 1.42 88 -- --
92.22 0.447 9.84 0.267 2.83 -0.779 -- 0.731 0.137 5.64 1.356 88 -- --
95.44 0.455 9.84 0.263 2.82 -0.766 -- -- 0.134 5.61 1.413 88 -- --
121.68 0.514 9.91 0.715 -- -3.21 -- 1.57 0.335 -- 0.57 587 -- --
103.83 0.478 9.86 0.24 3.16 -- 0.354 -- 0.0749 4.55 -- -- -- --
104.16 0.478 9.86 0.238 3.16 -- -- -- 0.073 4.54 -- -- -- --
108.73 0.486 9.87 0.534 -- -3.31 -- -- 0.222 -- 0.26 587 -- --
97.24 0.459 9.84 -- 2.84 -0.744 -- -- 0.103 5.58 1.418 85 -- --
636.87 1.18 9.89 0.36 -- -- -- -- 0.156 -- -- -- -- --
105.65 0.481 9.87 -- 3.16 -- -- -- 0.0465 4.54 -- -- -- --
115.74 0.501 9.88 -- -- -3.3 -- -- 0.189 -- 0.6803 583 -- --
640.3 1.18 9.9 -- -- -- -- -- 0.116 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 80.10 precipitation 0.1 90 < th dose independent rect. 3 10
2 80.10 precipitation 0.1 90 < th dose dependent rect. 3 10
3 80.59 temperature 15.0 90 > th dose independent rect. 13 14
4 80.80 temperature 10.0 90 > th dose dependent rect. 3 10
5 81.03 precipitation 0.1 270 < th dose independent rect. 1 11
6 81.03 precipitation 0.1 270 < th dose dependent rect. 1 11
7 81.13 temperature 15.0 90 > th dose independent rect. 3 10
8 81.15 temperature 20.0 720 > th dose independent rect. 13 4
9 81.16 precipitation 0.1 720 < th dose independent rect. 8 21
10 81.16 precipitation 0.1 720 < th dose dependent rect. 8 21
11 81.32 precipitation 0.1 720 < th dose independent rect. 17 18
12 81.32 precipitation 0.1 720 < th dose dependent rect. 17 18
14 81.53 atmosphere 995.0 90 > th dose independent rect. 3 10
15 81.53 atmosphere 1015.0 90 < th dose independent rect. 3 10
17 81.69 wind 9.0 90 < th dose independent rect. 3 10
18 81.72 wind 9.0 90 < th dose independent rect. 13 14
19 81.74 precipitation 0.1 720 < th dose independent rect. 23 6
20 81.74 precipitation 0.1 720 < th dose dependent rect. 23 6
24 82.13 precipitation 0.1 720 < th dose independent rect. 17 3
25 82.13 precipitation 0.1 720 < th dose dependent rect. 17 3
26 82.28 wind 1.0 720 > th dose independent rect. 17 3
27 82.30 wind 7.0 720 < th dose independent rect. 17 3
29 82.40 wind 9.0 720 < th dose independent rect. 17 18
30 82.51 precipitation 0.1 720 < th dose independent rect. 17 12
31 82.51 precipitation 0.1 720 < th dose dependent rect. 17 12
32 82.55 temperature 15.0 270 > th dose independent rect. 1 11
33 82.66 precipitation 0.1 720 < th dose independent rect. 17 20
34 82.66 precipitation 0.1 720 < th dose dependent rect. 17 20
37 82.70 temperature 10.0 270 > th dose dependent rect. 1 10
40 82.78 precipitation 0.1 720 < th dose independent rect. 23 15
41 82.78 precipitation 0.1 720 < th dose dependent rect. 23 15
42 82.89 wind 9.0 270 < th dose independent rect. 1 11
45 82.98 atmosphere 995.0 270 > th dose independent rect. 1 11
46 82.98 atmosphere 1015.0 270 < th dose independent rect. 1 11
48 83.01 atmosphere 1015.0 90 < th dose independent rect. 13 14
49 83.11 wind 7.0 720 < th dose independent rect. 17 11
55 83.36 radiation 40.0 90 < th dose independent rect. 13 14
58 83.49 wind 7.0 720 < th dose independent rect. 23 6
65 83.62 wind 7.0 720 < th dose independent rect. 5 3
66 83.63 humidity 70.0 720 > th dose independent rect. 19 13
67 83.64 temperature 10.0 720 > th dose independent rect. 17 3
68 83.64 atmosphere 1015.0 720 < th dose independent rect. 17 3
69 83.64 radiation 30.0 720 < th dose independent rect. 17 3
71 83.64 precipitation 0.1 10 < th dose independent rect. 3 11
72 83.64 temperature 10.0 720 > th dose independent rect. 20 21
73 83.64 precipitation 0.1 10 < th dose dependent rect. 3 11
74 83.66 radiation 1.0 720 < th dose dependent rect. 23 6
79 83.69 temperature 10.0 720 > th dose independent rect. 5 3
80 83.69 temperature 30.0 720 < th dose independent rect. 5 3
81 83.69 humidity 50.0 720 > th dose independent rect. 5 3
83 83.69 atmosphere 995.0 720 > th dose independent rect. 5 3
84 83.69 atmosphere 1015.0 720 < th dose independent rect. 5 3
85 83.69 temperature 10.0 720 > th dose independent rect. 8 21
87 83.70 atmosphere 1015.0 720 < th dose independent rect. 11 6
88 83.70 temperature 10.0 720 > th dose independent rect. 17 18
92 83.76 radiation 40.0 720 < th dose independent rect. 5 3
95 83.85 wind 9.0 720 < th dose independent rect. 8 21
98 83.89 radiation 1.0 720 < th dose independent rect. 23 6
105 83.92 temperature 10.0 720 > th dose independent rect. 23 6
106 83.92 temperature 30.0 720 < th dose independent rect. 23 6
107 83.92 humidity 50.0 720 > th dose independent rect. 23 6
110 83.92 atmosphere 995.0 720 > th dose independent rect. 23 6
114 83.92 temperature 10.0 720 > th dose independent rect. 5 18
124 84.03 precipitation 0.1 90 < th dose independent rect. 13 14
125 84.03 precipitation 0.1 90 < th dose dependent rect. 13 14
127 84.10 temperature 10.0 10 > th dose dependent rect. 3 10
133 84.23 precipitation 0.1 720 < th dose independent rect. 5 3
135 84.23 precipitation 0.1 720 < th dose dependent rect. 5 3
146 84.42 precipitation 0.1 720 < th dose independent rect. 1 4
147 84.42 precipitation 0.1 720 < th dose dependent rect. 1 4
150 84.49 humidity 70.0 720 > th dose independent rect. 19 6
151 84.52 humidity 50.0 270 > th dose independent rect. 1 10
160 84.71 precipitation 0.1 720 < th dose independent rect. 8 12
161 84.71 precipitation 0.1 720 < th dose dependent rect. 8 12
163 84.73 humidity 50.0 720 > th dose dependent rect. 20 3
184 84.93 radiation 40.0 720 < th dose dependent rect. 17 3
187 84.97 wind 1.0 720 > th dose independent rect. 8 12
188 84.98 temperature 10.0 90 > th dose dependent rect. 13 14
193 85.03 temperature 15.0 10 > th dose independent rect. 13 14
202 85.15 wind 9.0 720 < th dose independent rect. 17 20
208 85.23 humidity 50.0 720 > th dose dependent rect. 5 3
227 85.48 radiation 20.0 720 < th dose independent rect. 17 12
231 85.50 radiation 1.0 90 < th dose independent rect. 16 13
234 85.51 temperature 10.0 720 > th dose independent rect. 14 9
236 85.51 temperature 10.0 720 > th dose independent rect. 23 15
237 85.51 atmosphere 995.0 720 > th dose independent rect. 23 15
239 85.52 temperature 10.0 720 > th dose independent rect. 5 12
240 85.52 temperature 10.0 720 > th dose independent rect. 17 12
241 85.52 atmosphere 1015.0 720 < th dose independent rect. 5 12
277 85.66 radiation 10.0 90 < th dose dependent rect. 17 13
282 85.75 wind 9.0 720 < th dose independent rect. 8 12
291 85.80 wind 7.0 720 < th dose independent rect. 1 4
303 85.83 precipitation 0.1 10 < th dose independent rect. 13 14
305 85.83 precipitation 0.1 10 < th dose dependent rect. 13 14
306 85.84 atmosphere 1015.0 10 < th dose independent rect. 13 14
308 85.86 temperature 10.0 10 > th dose independent rect. 3 10
310 85.86 atmosphere 995.0 10 > th dose independent rect. 3 10
311 85.86 atmosphere 1015.0 10 < th dose independent rect. 3 10
314 85.87 radiation 1.0 720 < th dose dependent rect. 1 4
315 85.87 wind 9.0 90 < th dose dependent rect. 3 10
317 85.88 atmosphere 1015.0 720 < th dose independent rect. 13 4
318 85.88 temperature 10.0 720 > th dose independent rect. 17 20
340 86.00 temperature 10.0 720 > th dose independent rect. 8 12
341 86.00 temperature 10.0 720 > th dose independent rect. 20 12
342 86.00 temperature 30.0 720 < th dose independent rect. 20 12
343 86.00 humidity 50.0 720 > th dose independent rect. 20 12
345 86.00 atmosphere 995.0 720 > th dose independent rect. 20 12
346 86.00 atmosphere 1015.0 720 < th dose independent rect. 8 12
354 86.03 wind 9.0 10 < th dose independent rect. 13 14
359 86.04 radiation 40.0 720 < th dose independent rect. 20 12
361 86.05 radiation 40.0 270 < th dose dependent rect. 16 13
363 86.07 radiation 1.0 720 < th dose independent rect. 1 4
365 86.08 atmosphere 1015.0 720 < th dose independent rect. 1 4
367 86.08 precipitation 0.1 720 < th dose independent rect. 11 6
369 86.08 precipitation 0.1 720 < th dose dependent rect. 11 6
379 86.11 temperature 10.0 720 > th dose independent rect. 1 4
380 86.11 temperature 30.0 720 < th dose independent rect. 1 4
381 86.11 humidity 50.0 720 > th dose independent rect. 1 4
384 86.11 atmosphere 995.0 720 > th dose independent rect. 1 4
388 86.11 temperature 10.0 720 > th dose independent rect. 5 20
392 86.15 humidity 50.0 720 > th dose independent rect. 17 3
402 86.18 temperature 10.0 10 > th dose dependent rect. 14 13
404 86.20 wind 9.0 720 < th dose dependent rect. 5 3
422 86.37 wind 9.0 720 < th dose independent rect. 23 15
425 86.42 wind 9.0 270 < th dose independent rect. 5 11
434 86.45 humidity 50.0 90 > th dose independent rect. 3 10
435 86.45 wind 9.0 720 < th dose independent rect. 20 12
465 86.57 precipitation 0.1 720 < th dose independent rect. 5 11
466 86.57 precipitation 0.1 720 < th dose dependent rect. 5 11
469 86.59 wind 1.0 270 > th dose independent rect. 16 12
493 86.64 radiation 40.0 720 < th dose dependent rect. 5 3
530 86.74 temperature 10.0 720 > th dose dependent rect. 1 3
537 86.77 temperature 30.0 10 < th dose independent rect. 18 12
542 86.78 precipitation 0.1 90 < th dose independent rect. 18 12
545 86.78 precipitation 0.1 90 < th dose dependent rect. 18 12
592 86.96 wind 9.0 720 < th dose independent rect. 4 13
602 87.00 wind 7.0 90 < th dose independent rect. 18 12
608 87.02 atmosphere 1015.0 720 < th dose independent rect. 5 18
619 87.09 wind 9.0 720 < th dose independent rect. 11 6
629 87.12 wind 9.0 720 < th dose independent rect. 13 4
631 87.12 atmosphere 995.0 90 > th dose independent rect. 13 14
644 87.16 humidity 50.0 270 > th dose independent rect. 16 13
682 87.24 humidity 50.0 720 > th dose independent rect. 20 21
684 87.25 humidity 60.0 10 > th dose independent rect. 18 12
696 87.29 atmosphere 995.0 270 > th dose independent rect. 16 13
708 87.35 precipitation 0.1 10 < th dose independent rect. 18 12
710 87.35 precipitation 0.1 10 < th dose dependent rect. 18 12
717 87.37 atmosphere 995.0 720 > th dose independent rect. 20 21
734 87.40 radiation 1.0 90 < th dose dependent rect. 3 20
740 87.44 atmosphere 995.0 720 > th dose independent rect. 17 3
745 87.44 radiation 40.0 270 < th dose dependent rect. 20 12
755 87.46 humidity 50.0 720 > th dose independent rect. 17 18
765 87.49 temperature 10.0 90 > th dose independent rect. 18 12
776 87.51 wind 1.0 720 > th dose independent rect. 8 20
777 87.52 atmosphere 995.0 90 > th dose independent rect. 18 12
785 87.53 wind 9.0 720 < th dose dependent rect. 17 2
805 87.58 radiation 1.0 90 > th dose independent sin 22 NA
811 87.62 radiation 10.0 10 < th dose independent rect. 18 12
837 87.69 wind 1.0 90 > th dose independent rect. 13 14
841 87.70 precipitation 0.1 720 < th dose independent rect. 13 4
842 87.70 precipitation 0.1 720 < th dose independent rect. 1 19
843 87.70 precipitation 0.1 720 < th dose dependent rect. 13 4
844 87.70 precipitation 0.1 720 < th dose dependent rect. 1 19
847 87.72 atmosphere 995.0 720 > th dose independent rect. 5 11
860 87.77 wind 9.0 720 < th dose independent rect. 20 21
867 87.80 humidity 50.0 720 > th dose independent rect. 5 11
870 87.81 radiation 1.0 90 < th dose independent rect. 3 21
909 87.93 radiation 1.0 30 < th dose dependent sin 19 NA
968 88.09 wind 1.0 270 > th dose independent rect. 11 14