FiT-DB / Search/ Help/ Sample detail

Os06g0690100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.73 (0.021) R2 : 0.669
β1 : 0.778 (0.0768) R2dD : 0.0773 R2D : 0.083
β2 : 1.38 (0.05) R2dC : 0.557 R2C : 0.554
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.22 (0.0448) R2dN8 : 0.0234 R2N8 : 0.0289
σ : 0.395
deviance : 70.99
__
_____
C
peak time of C : 23.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
64.03 0.376 7.7 0.965 1.45 -0.45 -0.0621 0.773 -0.0998 23.1 30.21 2761 -- --
65.04 0.376 7.69 0.922 1.45 -0.435 -0.0117 -- -0.0985 23 30.19 2764 -- --
64.05 0.373 7.7 0.965 1.45 -0.45 -- 0.757 -0.0994 23.1 30.17 2759 -- --
64.96 0.375 7.7 0.89 1.46 -0.437 -- -- -0.113 23 30.17 2760 -- --
153.39 0.58 7.69 0.88 -- -0.831 -- -0.0242 -0.189 -- 30.17 2759 -- --
70.98 0.395 7.73 0.777 1.38 -- -0.0393 -- -0.22 23.1 -- -- -- --
70.99 0.395 7.73 0.778 1.38 -- -- -- -0.22 23.1 -- -- -- --
153.4 0.579 7.69 0.879 -- -0.831 -- -- -0.189 -- 30.17 2759 -- --
80.8 0.419 7.74 -- 1.47 -0.393 -- -- -0.249 22.5 10 7853 -- --
190.18 0.644 7.69 0.811 -- -- -- -- -0.208 -- -- -- -- --
86.96 0.436 7.75 -- 1.39 -- -- -- -0.306 23.1 -- -- -- --
128.33 0.529 7.73 -- -- -0.877 -- -- -0.353 -- 8.962 21938 -- --
207.51 0.672 7.71 -- -- -- -- -- -0.298 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 62.94 radiation 30.0 10 < th dose independent rect. 7 22
3 63.04 temperature 20.0 10 > th dose dependent rect. 5 2
6 63.40 temperature 20.0 10 > th dose independent rect. 5 2
9 63.47 radiation 10.0 30 < th dose independent rect. 5 2
10 63.56 atmosphere 1010.0 10 < th dose independent rect. 5 2
15 63.71 radiation 40.0 10 < th dose dependent rect. 7 22
20 64.03 radiation 1.0 10 > th dose independent rect. 5 2
36 64.22 wind 3.0 90 < th dose dependent rect. 5 2
38 64.29 radiation 1.0 10 > th dose dependent rect. 18 13
41 64.36 radiation 1.0 90 > th dose independent rect. 5 1
42 64.38 radiation 1.0 10 > th dose dependent rect. 5 2
54 64.41 atmosphere 1005.0 10 > th dose independent rect. 5 2
65 64.46 wind 3.0 10 < th dose independent rect. 5 2
68 64.51 radiation 30.0 10 < th dose independent rect. 8 5
70 64.51 wind 7.0 10 < th dose dependent rect. 5 2
89 64.66 atmosphere 995.0 10 > th dose independent rect. 7 22
90 64.67 radiation 20.0 270 < th dose independent rect. 7 5
96 64.73 radiation 30.0 10 < th dose independent rect. 10 19
98 64.74 precipitation 0.1 10 < th dose independent rect. 5 2
100 64.74 precipitation 0.1 10 < th dose dependent rect. 5 2
104 64.75 temperature 10.0 10 > th dose independent rect. 5 2
106 64.75 temperature 30.0 10 < th dose independent rect. 5 2
107 64.75 humidity 50.0 10 > th dose independent rect. 5 2
110 64.75 atmosphere 995.0 10 > th dose independent rect. 5 2
115 64.75 temperature 10.0 10 > th dose independent rect. 7 22
119 64.78 precipitation 0.1 10 < th dose independent rect. 7 22
120 64.78 precipitation 0.1 10 < th dose dependent rect. 7 22
125 64.84 humidity 50.0 10 > th dose dependent rect. 5 2
132 64.92 radiation 30.0 270 < th dose independent rect. 7 19
133 64.92 wind 9.0 10 < th dose independent rect. 7 22
135 64.94 wind 1.0 90 < th dose independent rect. 4 3
141 65.02 radiation 40.0 270 < th dose dependent rect. 7 5
143 65.03 radiation 40.0 10 < th dose dependent rect. 10 19
176 65.11 radiation 10.0 4320 > th dose independent rect. 16 16
183 65.16 radiation 40.0 30 < th dose dependent rect. 5 2
189 65.18 temperature 10.0 10 > th dose dependent rect. 5 18
193 65.20 humidity 50.0 10 > th dose independent rect. 7 22
195 65.20 atmosphere 995.0 10 > th dose dependent rect. 5 2
206 65.24 temperature 25.0 1440 > th dose dependent rect. 5 2
226 65.36 radiation 40.0 270 < th dose dependent rect. 7 19
248 65.44 radiation 30.0 10 < th dose independent rect. 23 14
251 65.44 atmosphere 1015.0 10 < th dose dependent rect. 5 2
254 65.46 wind 3.0 90 < th dose dependent rect. 4 5
255 65.46 radiation 40.0 10 < th dose dependent rect. 8 5
257 65.47 temperature 30.0 30 < th dose independent rect. 7 22
266 65.50 radiation 10.0 4320 > th dose dependent rect. 16 16
280 65.55 radiation 20.0 1440 < th dose independent rect. 15 19
281 65.55 atmosphere 1015.0 10 < th dose independent rect. 7 22
282 65.55 radiation 40.0 4320 < th dose dependent rect. 16 16
293 65.58 radiation 30.0 270 < th dose independent rect. 21 15
300 65.59 wind 3.0 270 < th dose dependent rect. 2 5
301 65.60 radiation 20.0 1440 < th dose independent sin 13 NA
314 65.63 radiation 30.0 270 < th dose independent rect. 7 10
320 65.65 temperature 25.0 10 > th dose dependent rect. 22 9
334 65.69 radiation 20.0 1440 < th dose dependent rect. 15 18
354 65.75 radiation 40.0 4320 < th dose dependent rect. 24 7
360 65.76 radiation 1.0 1440 > th dose dependent rect. 16 20
364 65.77 radiation 1.0 4320 > th dose dependent rect. 6 1
365 65.77 radiation 30.0 4320 < th dose dependent rect. 6 1
369 65.78 radiation 30.0 1440 > th dose independent rect. 11 1
381 65.78 radiation 40.0 90 < th dose dependent rect. 10 18
384 65.79 radiation 10.0 4320 > th dose independent sin 12 NA
392 65.79 radiation 30.0 4320 < th dose dependent rect. 19 12
394 65.79 radiation 1.0 1440 > th dose dependent rect. 16 18
396 65.79 wind 9.0 10 < th dose dependent rect. 7 22
397 65.80 radiation 30.0 1440 > th dose independent rect. 9 4
422 65.81 radiation 40.0 1440 < th dose dependent rect. 16 20
453 65.84 radiation 30.0 1440 < th dose independent rect. 11 23
487 65.86 radiation 1.0 1440 > th dose dependent sin 12 NA
498 65.87 radiation 30.0 1440 > th dose independent rect. 9 6
502 65.87 radiation 30.0 1440 > th dose independent rect. 11 23
503 65.87 radiation 30.0 1440 < th dose dependent sin 12 NA
510 65.88 radiation 30.0 1440 < th dose independent rect. 8 5
512 65.88 radiation 30.0 1440 > th dose independent rect. 9 8
567 65.90 radiation 40.0 1440 < th dose independent rect. 11 1
584 65.90 radiation 30.0 1440 > th dose independent rect. 14 23
590 65.91 radiation 30.0 1440 > th dose independent sin 1 NA
595 65.91 radiation 30.0 1440 < th dose independent rect. 8 7
598 65.91 radiation 20.0 1440 > th dose independent rect. 14 20
601 65.91 radiation 30.0 1440 > th dose independent rect. 16 23
619 65.93 radiation 30.0 1440 > th dose independent no NA NA
620 65.93 radiation 30.0 10 < th dose independent rect. 10 2
753 65.94 radiation 30.0 1440 < th dose independent rect. 8 19
762 65.94 radiation 30.0 1440 < th dose independent rect. 16 23
763 65.94 radiation 40.0 90 < th dose dependent rect. 10 1
770 65.95 radiation 30.0 1440 < th dose independent sin 2 NA
774 65.95 radiation 30.0 1440 < th dose independent rect. 8 9
787 65.95 radiation 30.0 1440 < th dose independent rect. 24 15
839 65.97 radiation 40.0 1440 > th dose independent sin 7 NA
869 65.97 radiation 30.0 1440 < th dose independent rect. 24 18
876 65.97 radiation 30.0 1440 < th dose independent rect. 24 21
889 65.98 radiation 30.0 1440 < th dose independent no NA NA
976 65.98 radiation 10.0 1440 > th dose dependent rect. 11 23