Os06g0689600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to S-receptor kinase-like protein 1.
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Os06g0689600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to S-receptor kinase-like protein 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.28 | 0.287 | 3.27 | 0.215 | 0.198 | 0.269 | -0.111 | 1.23 | -0.0435 | 7.61 | 91 | 5914 | -- | -- |
| 39.44 | 0.292 | 3.26 | 0.161 | 0.226 | 0.319 | -0.0819 | -- | -0.0597 | 7.85 | 92 | 6639 | -- | -- |
| 37.31 | 0.284 | 3.27 | 0.213 | 0.197 | 0.267 | -- | 1.23 | -0.0429 | 7.73 | 91 | 5914 | -- | -- |
| 39.34 | 0.292 | 3.27 | 0.127 | 0.23 | 0.326 | -- | -- | -0.0791 | 7.4 | 92 | 4790 | -- | -- |
| 39.39 | 0.292 | 3.27 | 0.213 | -- | 0.264 | -- | 1.21 | -0.0383 | -- | 90.9 | 5850 | -- | -- |
| 40.64 | 0.299 | 3.25 | 0.112 | 0.195 | -- | -0.128 | -- | -0.00765 | 7.55 | -- | -- | -- | -- |
| 40.68 | 0.299 | 3.25 | 0.109 | 0.195 | -- | -- | -- | -0.00726 | 7.71 | -- | -- | -- | -- |
| 41.45 | 0.3 | 3.27 | 0.158 | -- | 0.32 | -- | -- | -0.0704 | -- | 92 | 7146 | -- | -- |
| 39.71 | 0.294 | 3.27 | -- | 0.21 | 0.326 | -- | -- | -0.0797 | 7.33 | 88 | 4571 | -- | -- |
| 42.72 | 0.305 | 3.26 | 0.112 | -- | -- | -- | -- | -0.00444 | -- | -- | -- | -- | -- |
| 41 | 0.3 | 3.26 | -- | 0.195 | -- | -- | -- | -0.0194 | 7.67 | -- | -- | -- | -- |
| 41.92 | 0.302 | 3.27 | -- | -- | 0.285 | -- | -- | -0.0702 | -- | 87.75 | 5751 | -- | -- |
| 43.05 | 0.306 | 3.26 | -- | -- | -- | -- | -- | -0.0168 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.88 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 4 | 36.26 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 7 | 36.39 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 3 | 6 |
| 14 | 36.65 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 17 | 36.72 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 21 | 13 |
| 18 | 36.74 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 23 | 11 |
| 24 | 36.82 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 25 | 36.82 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 21 | 13 |
| 27 | 36.83 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 39 | 36.90 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 50 | 36.91 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 55 | 37.02 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 59 | 37.07 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 60 | 37.08 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 72 | 37.18 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 2 |
| 80 | 37.24 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 2 |
| 84 | 37.24 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 7 | 8 |
| 88 | 37.25 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 90 | 37.25 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 3 | 8 |
| 92 | 37.27 | wind | 3.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 95 | 37.27 | humidity | 80.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 131 | 37.32 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 4 | 11 |
| 146 | 37.33 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 8 |
| 150 | 37.33 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 156 | 37.34 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 163 | 37.35 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 167 | 37.35 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 168 | 37.35 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 184 | 37.37 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 199 | 37.39 | wind | 3.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 226 | 37.40 | humidity | 70.0 | 4320 | > th | dose independent | sin | 4 | NA |
| 228 | 37.40 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 229 | 37.40 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 232 | 37.40 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 236 | 37.40 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 245 | 37.40 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 246 | 37.40 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 279 | 37.40 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 332 | 37.42 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 363 | 37.42 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 394 | 37.44 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 396 | 37.44 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 397 | 37.44 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 400 | 37.44 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 401 | 37.44 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 402 | 37.44 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 404 | 37.44 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 409 | 37.44 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 414 | 37.44 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 415 | 37.44 | wind | 5.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 419 | 37.44 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 425 | 37.44 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 430 | 37.44 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 434 | 37.44 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 3 | 12 |
| 456 | 37.45 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 23 | 16 |
| 457 | 37.46 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 464 | 37.46 | humidity | 50.0 | 4320 | > th | dose dependent | sin | 4 | NA |
| 504 | 37.48 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 564 | 37.49 | humidity | 80.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 583 | 37.50 | humidity | 70.0 | 4320 | < th | dose independent | sin | 4 | NA |
| 670 | 37.53 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 688 | 37.53 | humidity | 90.0 | 4320 | < th | dose dependent | sin | 4 | NA |
| 771 | 37.55 | temperature | 10.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 772 | 37.55 | temperature | 10.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 773 | 37.55 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 795 | 37.55 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 799 | 37.56 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 820 | 37.56 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 917 | 37.61 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 921 | 37.61 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 11 | 16 |
| 946 | 37.61 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 11 | 16 |