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Os06g0687700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to T-complex protein 1, eta subunit (TCP-1-eta) (CCT-eta) (HIV-1 Nef interacting protein).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.0147) R2 : 0.559
β1 : 1.2 (0.0537) R2dD : 0.497 R2D : 0.335
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.411 (0.0313) R2dN8 : 0.224 R2N8 : 0.0616
σ : 0.275
deviance : 34.7
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
30.22 0.258 12.6 1.09 0.168 -0.337 -0.0697 1.05 0.475 14 1.1 1265 -- --
31.9 0.263 12.6 1.16 0.163 -0.291 -0.0967 -- 0.443 13.9 0.4998 1601 -- --
30.24 0.256 12.6 1.09 0.168 -0.337 -- 1.06 0.475 14.2 1.1 1264 -- --
31.8 0.263 12.6 1.17 0.18 -0.27 -- -- 0.463 14.1 0.6 2699 -- --
31.93 0.263 12.6 1.08 -- -0.35 -- 1.08 0.476 -- 1.1 1264 -- --
32.6 0.268 12.6 1.21 0.177 -- -0.195 -- 0.416 13.2 -- -- -- --
32.72 0.268 12.6 1.2 0.181 -- -- -- 0.415 13.8 -- -- -- --
32.27 0.265 12.6 1.05 -- -0.348 -- -- 0.408 -- 3.888 13980 -- --
39.17 0.291 12.6 -- 0.155 -1.21 -- -- 0.221 14.6 7.7 27733 -- --
34.7 0.275 12.6 1.2 -- -- -- -- 0.411 -- -- -- -- --
70.84 0.394 12.6 -- 0.159 -- -- -- 0.282 13.5 -- -- -- --
40.66 0.297 12.6 -- -- -1.18 -- -- 0.195 -- 7.4 26840 -- --
72.38 0.397 12.6 -- -- -- -- -- 0.279 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.01 atmosphere 1005 10 > th dose dependent rect. 24 9
2 29.02 atmosphere 1005 30 > th dose independent rect. 24 9
8 29.25 atmosphere 1005 270 > th dose dependent rect. 24 6
9 29.26 atmosphere 1005 10 > th dose dependent rect. 3 6
11 29.31 radiation 20 1440 < th dose dependent rect. 11 2
13 29.32 wind 1 4320 > th dose dependent rect. 8 2
16 29.34 wind 7 4320 < th dose dependent rect. 8 2
35 29.45 wind 7 4320 < th dose dependent rect. 6 4
38 29.46 wind 1 4320 > th dose dependent rect. 6 4
43 29.48 wind 1 14400 < th dose independent rect. 24 2
44 29.48 atmosphere 1005 10 > th dose independent rect. 3 6
48 29.49 temperature 10 30 > th dose dependent rect. 9 15
54 29.52 wind 3 4320 > th dose independent rect. 5 6
55 29.52 radiation 10 1440 < th dose dependent rect. 10 5
56 29.53 wind 3 4320 > th dose independent rect. 8 2
57 29.53 radiation 20 1440 < th dose independent rect. 11 3
66 29.56 radiation 10 1440 < th dose independent rect. 14 1
82 29.58 temperature 10 10 > th dose dependent rect. 9 18
84 29.59 wind 1 1440 < th dose independent rect. 6 7
94 29.62 wind 3 4320 < th dose independent rect. 8 1
98 29.62 wind 1 14400 < th dose independent rect. 22 6
103 29.63 atmosphere 1005 720 > th dose independent rect. 20 2
105 29.63 wind 1 14400 > th dose independent rect. 23 5
106 29.63 wind 1 1440 > th dose independent rect. 6 20
113 29.65 wind 1 14400 > th dose independent rect. 24 2
132 29.69 wind 1 4320 < th dose independent rect. 6 1
140 29.70 temperature 10 43200 > th dose independent rect. 10 4
171 29.73 wind 1 1440 < th dose independent rect. 6 20
199 29.77 radiation 10 1440 > th dose independent rect. 12 1
210 29.78 wind 1 14400 < th dose independent rect. 14 14
219 29.79 temperature 20 4320 < th dose independent rect. 17 4
220 29.79 wind 1 1440 > th dose independent rect. 6 22
221 29.79 wind 1 1440 < th dose independent rect. 6 22
227 29.79 wind 1 14400 < th dose dependent rect. 12 16
249 29.82 temperature 10 43200 > th dose independent rect. 10 6
287 29.85 temperature 10 270 > th dose dependent rect. 6 18
299 29.87 wind 1 270 > th dose independent rect. 10 23
309 29.87 wind 1 14400 < th dose dependent rect. 6 22
310 29.88 wind 1 4320 > th dose independent rect. 6 1
311 29.88 temperature 20 4320 < th dose independent rect. 19 1
320 29.88 temperature 15 270 > th dose dependent rect. 9 1
321 29.88 temperature 20 4320 < th dose dependent rect. 18 1
323 29.88 wind 5 270 < th dose dependent rect. 7 4
331 29.89 temperature 20 4320 > th dose independent rect. 16 5
345 29.90 humidity 90 720 > th dose dependent rect. 22 3
351 29.91 wind 3 270 < th dose independent rect. 7 4
364 29.92 wind 1 14400 > th dose independent rect. 14 14
365 29.92 atmosphere 1005 30 > th dose independent rect. 15 18
427 29.98 humidity 90 270 < th dose dependent rect. 9 1
466 30.01 temperature 20 4320 > th dose independent rect. 19 1
475 30.01 wind 3 1440 < th dose dependent sin 4 NA
478 30.01 wind 1 14400 < th dose dependent rect. 23 5
480 30.01 temperature 10 270 > th dose dependent rect. 5 7
484 30.01 temperature 10 90 > th dose dependent rect. 5 22
492 30.02 radiation 10 1440 < th dose independent rect. 11 13
497 30.02 temperature 20 4320 < th dose dependent rect. 20 1
498 30.02 temperature 15 30 > th dose dependent rect. 9 4
514 30.03 temperature 20 4320 < th dose dependent rect. 18 4
519 30.03 atmosphere 1010 10 < th dose dependent rect. 22 13
542 30.05 wind 1 1440 > th dose independent sin 3 NA
547 30.05 wind 1 270 > th dose independent rect. 23 8
561 30.06 wind 1 270 > th dose independent rect. 3 1
567 30.06 wind 1 1440 > th dose independent rect. 23 20
577 30.06 wind 1 1440 < th dose dependent rect. 3 15
589 30.07 wind 1 1440 < th dose independent rect. 6 12
599 30.07 atmosphere 1005 270 > th dose dependent rect. 4 1
605 30.07 atmosphere 1010 90 < th dose dependent rect. 23 11
610 30.08 wind 1 270 > th dose independent rect. 24 6
643 30.09 humidity 80 720 < th dose dependent rect. 20 1
645 30.09 humidity 90 720 < th dose dependent rect. 20 3
667 30.10 wind 1 1440 > th dose independent rect. 3 23
676 30.10 atmosphere 1005 10 < th dose dependent rect. 24 10
681 30.11 wind 1 1440 < th dose independent sin 3 NA
698 30.11 humidity 90 720 < th dose dependent rect. 19 6
706 30.12 wind 1 43200 > th dose independent sin 15 NA
717 30.12 wind 1 1440 > th dose independent rect. 6 12
719 30.12 wind 1 1440 > th dose independent rect. 3 15
721 30.12 wind 9 270 < th dose dependent rect. 9 1
727 30.12 wind 9 270 < th dose dependent rect. 5 7
737 30.13 wind 3 4320 < th dose independent sin 5 NA
738 30.13 radiation 10 270 > th dose independent rect. 9 1
740 30.13 humidity 80 10 < th dose independent rect. 9 4
749 30.13 temperature 20 10 > th dose independent rect. 9 15
766 30.14 wind 3 4320 > th dose independent sin 5 NA
771 30.14 wind 1 14400 < th dose independent rect. 6 22
798 30.15 wind 5 30 < th dose independent rect. 3 6
802 30.15 wind 5 10 < th dose independent rect. 24 9
826 30.16 wind 1 1440 < th dose independent rect. 23 20
843 30.17 humidity 70 720 > th dose independent rect. 10 1
851 30.17 wind 1 1440 < th dose independent rect. 3 15
859 30.17 radiation 1 270 > th dose dependent rect. 9 1
878 30.18 wind 1 43200 < th dose independent sin 15 NA
880 30.18 humidity 90 720 < th dose independent rect. 20 5
903 30.18 wind 1 1440 < th dose dependent rect. 6 12
910 30.19 humidity 90 720 < th dose independent rect. 21 3
922 30.19 wind 1 14400 > th dose independent rect. 6 22
945 30.20 wind 5 270 < th dose independent rect. 24 6
949 30.20 temperature 20 90 > th dose independent rect. 22 15
951 30.20 temperature 20 10 > th dose independent rect. 9 18
972 30.20 wind 1 14400 < th dose dependent rect. 21 23
989 30.21 temperature 20 10 > th dose independent rect. 22 15
1000 30.21 humidity 70 720 > th dose dependent rect. 22 4