Os06g0686800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0686800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.11 | 0.29 | 3.05 | 0.112 | 0.0785 | 2.26 | 0.184 | 4.66 | 0.0103 | 10.6 | 16.92 | 558 | -- | -- |
| 41.04 | 0.298 | 3.02 | 0.147 | 0.0884 | 0.266 | 0.413 | -- | 0.0314 | 11 | 19.71 | 899 | -- | -- |
| 38.2 | 0.288 | 3.05 | 0.118 | 0.0823 | 2.31 | -- | 4.79 | 0.00948 | 9.42 | 16.91 | 566 | -- | -- |
| 41.65 | 0.301 | 3.02 | 0.16 | 0.088 | 0.256 | -- | -- | 0.0289 | 10.1 | 20.1 | 861 | -- | -- |
| 38.6 | 0.289 | 3.05 | 0.118 | -- | 2.23 | -- | 4.61 | 0.0113 | -- | 17 | 585 | -- | -- |
| 41.52 | 0.302 | 3.02 | 0.0877 | 0.102 | -- | 0.389 | -- | 0.00423 | 11.6 | -- | -- | -- | -- |
| 42.1 | 0.304 | 3.02 | 0.102 | 0.108 | -- | -- | -- | 0.00486 | 10.1 | -- | -- | -- | -- |
| 42.12 | 0.302 | 3.02 | 0.165 | -- | 0.287 | -- | -- | 0.0316 | -- | 20.35 | 775 | -- | -- |
| 42.18 | 0.302 | 3.02 | -- | 0.0972 | 0.157 | -- | -- | 0.00168 | 9.93 | 19.67 | 714 | -- | -- |
| 42.81 | 0.306 | 3.02 | 0.101 | -- | -- | -- | -- | 0.00469 | -- | -- | -- | -- | -- |
| 42.37 | 0.304 | 3.02 | -- | 0.108 | -- | -- | -- | -0.00652 | 10.1 | -- | -- | -- | -- |
| 42.73 | 0.304 | 3.02 | -- | -- | 0.195 | -- | -- | 0.00587 | -- | 20.1 | 716 | -- | -- |
| 43.08 | 0.306 | 3.03 | -- | -- | -- | -- | -- | -0.00648 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.54 | wind | 9.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 2 | 38.02 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 4 | 38.05 | wind | 9.0 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 37 | 38.05 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 70 | 38.09 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 71 | 38.10 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 72 | 38.11 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 74 | 38.16 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 75 | 38.16 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 82 | 38.17 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 84 | 38.19 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 16 | 2 |
| 86 | 38.19 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 88 | 38.20 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 93 | 38.20 | wind | 1.0 | 720 | < th | dose dependent | rect. | 8 | 1 |
| 97 | 38.21 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 98 | 38.22 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 100 | 38.22 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 101 | 38.22 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 12 | 6 |
| 118 | 38.26 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 120 | 38.26 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 121 | 38.26 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 124 | 38.26 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 126 | 38.26 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 128 | 38.26 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 133 | 38.26 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 135 | 38.26 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 136 | 38.26 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 141 | 38.26 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 142 | 38.27 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 143 | 38.28 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 146 | 38.29 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 157 | 38.37 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 164 | 38.41 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 168 | 38.45 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 17 | 3 |
| 176 | 38.47 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 12 | 8 |
| 179 | 38.49 | wind | 9.0 | 4320 | < th | dose independent | rect. | 3 | 3 |
| 182 | 38.50 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 190 | 38.54 | wind | 1.0 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 196 | 38.58 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 204 | 38.62 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 3 |
| 207 | 38.63 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 209 | 38.63 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 211 | 38.64 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 214 | 38.66 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 216 | 38.66 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 221 | 38.66 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 8 | 12 |
| 233 | 38.70 | wind | 1.0 | 270 | < th | dose dependent | rect. | 7 | 13 |
| 236 | 38.71 | wind | 9.0 | 4320 | < th | dose independent | rect. | 24 | 6 |
| 250 | 38.73 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 7 | 14 |
| 254 | 38.75 | wind | 9.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 263 | 38.76 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 7 | 4 |
| 271 | 38.79 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 272 | 38.79 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 288 | 38.83 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 7 | 16 |
| 295 | 38.86 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 335 | 38.91 | wind | 9.0 | 4320 | < th | dose independent | rect. | 24 | 9 |
| 343 | 38.92 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 344 | 38.93 | wind | 7.0 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 348 | 38.94 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 358 | 38.95 | wind | 9.0 | 4320 | < th | dose independent | rect. | 3 | 6 |
| 380 | 38.99 | wind | 5.0 | 4320 | > th | dose independent | rect. | 2 | 6 |
| 388 | 39.02 | wind | 5.0 | 4320 | > th | dose independent | rect. | 3 | 4 |
| 391 | 39.02 | wind | 5.0 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 408 | 39.05 | wind | 5.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 414 | 39.06 | temperature | 20.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 445 | 39.09 | wind | 1.0 | 270 | < th | dose independent | rect. | 7 | 2 |
| 463 | 39.10 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 466 | 39.10 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 470 | 39.10 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 479 | 39.10 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 480 | 39.10 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 503 | 39.10 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 522 | 39.11 | wind | 5.0 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 542 | 39.14 | wind | 9.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 567 | 39.17 | wind | 1.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 571 | 39.18 | wind | 9.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 580 | 39.18 | wind | 1.0 | 30 | < th | dose independent | rect. | 13 | 14 |
| 582 | 39.18 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 607 | 39.21 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 666 | 39.25 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 676 | 39.26 | wind | 3.0 | 10 | < th | dose dependent | rect. | 10 | 5 |
| 712 | 39.29 | wind | 1.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 746 | 39.31 | wind | 1.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 750 | 39.31 | temperature | 20.0 | 720 | < th | dose independent | rect. | 7 | 2 |
| 779 | 39.32 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 879 | 39.34 | wind | 9.0 | 43200 | < th | dose independent | rect. | 1 | 6 |