Os06g0686500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase M3A and M3B, thimet/oligopeptidase F domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0686500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase M3A and M3B, thimet/oligopeptidase F domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121.4 | 0.518 | 3.71 | 0.255 | 0.998 | 1.57 | 0.525 | -0.604 | -0.125 | 16.8 | 22.82 | 114 | -- | -- |
| 121.55 | 0.513 | 3.69 | 0.347 | 1.01 | 1.52 | 0.409 | -- | -0.101 | 16.8 | 22.69 | 109 | -- | -- |
| 121.95 | 0.514 | 3.7 | 0.328 | 0.999 | 1.55 | -- | -0.13 | -0.103 | 16.8 | 22.8 | 109 | -- | -- |
| 121.96 | 0.514 | 3.69 | 0.349 | 1 | 1.54 | -- | -- | -0.098 | 16.8 | 22.79 | 109 | -- | -- |
| 153.69 | 0.577 | 3.69 | 0.0582 | -- | 2.32 | -- | -1.06 | -0.188 | -- | 23.9 | 154 | -- | -- |
| 159.38 | 0.592 | 3.65 | 0.653 | 1.61 | -- | 0.919 | -- | 0.128 | 16.4 | -- | -- | -- | -- |
| 161.69 | 0.595 | 3.65 | 0.661 | 1.62 | -- | -- | -- | 0.133 | 16.4 | -- | -- | -- | -- |
| 154.72 | 0.579 | 3.7 | 0.206 | -- | 2.34 | -- | -- | -0.173 | -- | 23.77 | 150 | -- | -- |
| 124.94 | 0.521 | 3.71 | -- | 0.959 | 1.65 | -- | -- | -0.154 | 16.9 | 22.6 | 109 | -- | -- |
| 302.05 | 0.812 | 3.64 | 0.597 | -- | -- | -- | -- | 0.0899 | -- | -- | -- | -- | -- |
| 173.21 | 0.616 | 3.66 | -- | 1.6 | -- | -- | -- | 0.0591 | 16.4 | -- | -- | -- | -- |
| 155.77 | 0.581 | 3.7 | -- | -- | 2.38 | -- | -- | -0.209 | -- | 23.62 | 150 | -- | -- |
| 311.46 | 0.824 | 3.65 | -- | -- | -- | -- | -- | 0.0236 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 118.17 | temperature | 20 | 90 | > th | dose dependent | rect. | 9 | 13 |
| 3 | 119.44 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 13 |
| 6 | 120.52 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 10 | 120.79 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 11 |
| 38 | 121.40 | temperature | 30 | 10 | < th | dose dependent | sin | 21 | NA |
| 46 | 121.57 | temperature | 30 | 90 | < th | dose dependent | sin | 22 | NA |
| 85 | 122.61 | temperature | 20 | 10 | > th | dose dependent | sin | 21 | NA |
| 97 | 122.71 | temperature | 10 | 10 | > th | dose dependent | sin | 21 | NA |
| 126 | 123.13 | temperature | 20 | 90 | > th | dose dependent | sin | 22 | NA |
| 163 | 123.47 | temperature | 25 | 90 | > th | dose dependent | rect. | 16 | 23 |
| 207 | 124.05 | temperature | 20 | 720 | > th | dose dependent | rect. | 8 | 3 |
| 223 | 124.13 | temperature | 25 | 90 | > th | dose dependent | no | NA | NA |
| 250 | 124.39 | temperature | 25 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 271 | 124.51 | temperature | 25 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 293 | 124.72 | temperature | 25 | 270 | > th | dose independent | sin | 23 | NA |
| 294 | 124.72 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 13 |
| 377 | 125.27 | temperature | 25 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 426 | 125.60 | temperature | 25 | 270 | < th | dose independent | sin | 23 | NA |
| 468 | 125.80 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 9 |
| 527 | 126.14 | temperature | 20 | 720 | > th | dose dependent | sin | 3 | NA |
| 531 | 126.15 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 6 |
| 563 | 126.33 | temperature | 25 | 720 | > th | dose independent | rect. | 8 | 4 |
| 635 | 126.85 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 12 |
| 682 | 127.07 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 12 |
| 697 | 127.24 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 17 |
| 708 | 127.29 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 709 | 127.30 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 16 |
| 728 | 127.37 | temperature | 25 | 270 | < th | dose independent | rect. | 5 | 16 |
| 774 | 127.56 | temperature | 25 | 720 | < th | dose independent | rect. | 6 | 8 |
| 815 | 127.76 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 22 |