Os06g0684500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0684500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.84 | 0.542 | 3.21 | 0.00654 | 0.0409 | 0.18 | -0.146 | -0.2 | -0.302 | 2.17 | 1005 | 89 | -- | -- |
| 133.05 | 0.537 | 3.21 | 0.00833 | 0.0372 | 0.176 | -0.147 | -- | -0.296 | 2.21 | 1005 | 75 | -- | -- |
| 132.9 | 0.537 | 3.21 | 0.00983 | 0.0396 | 0.18 | -- | -0.197 | -0.302 | 1.24 | 1005 | 75 | -- | -- |
| 133.13 | 0.537 | 3.21 | 0.0144 | 0.0386 | 0.176 | -- | -- | -0.294 | 0.913 | 1005 | 75 | -- | -- |
| 133 | 0.537 | 3.21 | 0.0123 | -- | 0.182 | -- | -0.192 | -0.301 | -- | 1005 | 75 | -- | -- |
| 135.58 | 0.546 | 3.19 | 0.00626 | 0.0652 | -- | -0.109 | -- | -0.222 | 3.27 | -- | -- | -- | -- |
| 135.62 | 0.545 | 3.19 | 0.00839 | 0.0649 | -- | -- | -- | -0.221 | 3.4 | -- | -- | -- | -- |
| 133.22 | 0.538 | 3.21 | 0.0157 | -- | 0.178 | -- | -- | -0.294 | -- | 1005 | 73 | -- | -- |
| 133.13 | 0.537 | 3.21 | -- | 0.0391 | 0.176 | -- | -- | -0.295 | 0.869 | 1005 | 75 | -- | -- |
| 135.86 | 0.545 | 3.19 | 0.0111 | -- | -- | -- | -- | -0.22 | -- | -- | -- | -- | -- |
| 135.62 | 0.545 | 3.19 | -- | 0.0651 | -- | -- | -- | -0.222 | 3.39 | -- | -- | -- | -- |
| 133.22 | 0.538 | 3.21 | -- | -- | 0.177 | -- | -- | -0.296 | -- | 1005 | 71 | -- | -- |
| 135.86 | 0.544 | 3.19 | -- | -- | -- | -- | -- | -0.221 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.85 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 4 | 120.85 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 24 | 120.91 | humidity | 70.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 84 | 120.91 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 147 | 120.95 | wind | 1.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 148 | 121.02 | wind | 1.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 151 | 126.35 | radiation | 30.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 221 | 127.11 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 225 | 127.47 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 226 | 127.56 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 5 | 1 |
| 235 | 127.72 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 236 | 127.72 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 242 | 127.88 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 246 | 127.94 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 1 |
| 252 | 128.06 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 253 | 128.12 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 255 | 128.18 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 5 | 1 |
| 326 | 129.43 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 5 | 9 |
| 333 | 129.48 | atmosphere | 1000.0 | 30 | < th | dose independent | rect. | 24 | 9 |
| 349 | 129.66 | humidity | 80.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 359 | 129.85 | radiation | 20.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 410 | 129.90 | wind | 1.0 | 10 | < th | dose independent | rect. | 7 | 6 |
| 420 | 130.13 | humidity | 70.0 | 30 | > th | dose independent | rect. | 14 | 2 |
| 552 | 130.72 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 561 | 130.79 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 20 |
| 568 | 130.85 | wind | 7.0 | 90 | > th | dose independent | rect. | 19 | 1 |
| 569 | 130.87 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 573 | 130.89 | wind | 7.0 | 30 | > th | dose dependent | rect. | 19 | 1 |
| 590 | 130.96 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 22 |
| 606 | 131.01 | wind | 1.0 | 43200 | < th | dose independent | rect. | 8 | 23 |
| 610 | 131.03 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 613 | 131.04 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 22 |
| 618 | 131.06 | wind | 1.0 | 43200 | < th | dose independent | rect. | 16 | 22 |
| 628 | 131.10 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 17 |
| 630 | 131.10 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 23 |
| 637 | 131.12 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 652 | 131.14 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 23 |
| 653 | 131.15 | wind | 1.0 | 43200 | < th | dose independent | no | NA | NA |
| 669 | 131.16 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 23 |
| 682 | 131.19 | wind | 1.0 | 43200 | > th | dose independent | no | NA | NA |
| 687 | 131.19 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 688 | 131.19 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 23 |
| 696 | 131.20 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 23 |
| 701 | 131.20 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 711 | 131.22 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 8 |
| 722 | 131.23 | humidity | 80.0 | 720 | > th | dose independent | rect. | 10 | 4 |
| 729 | 131.24 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 730 | 131.24 | humidity | 80.0 | 720 | < th | dose independent | rect. | 9 | 6 |
| 732 | 131.24 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 749 | 131.28 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 19 |
| 753 | 131.28 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 4 | 4 |
| 758 | 131.30 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 766 | 131.31 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 6 |
| 811 | 131.42 | humidity | 80.0 | 720 | > th | dose independent | rect. | 9 | 6 |
| 839 | 131.49 | wind | 1.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 848 | 131.50 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 22 | 4 |
| 859 | 131.51 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 13 |
| 865 | 131.52 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 9 |
| 867 | 131.53 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 873 | 131.54 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 14 | 14 |
| 880 | 131.56 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 22 | 4 |
| 891 | 131.58 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 898 | 131.58 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 4 |
| 904 | 131.60 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 7 | 5 |
| 910 | 131.60 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 11 |
| 942 | 131.65 | wind | 1.0 | 43200 | > th | dose independent | rect. | 6 | 5 |
| 947 | 131.65 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 952 | 131.66 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 953 | 131.66 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 12 | 9 |
| 959 | 131.67 | wind | 1.0 | 43200 | < th | dose independent | sin | 2 | NA |
| 967 | 131.67 | wind | 1.0 | 43200 | < th | dose dependent | sin | 0 | NA |
| 971 | 131.67 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 18 |
| 998 | 131.70 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 1000 | 131.70 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 18 | 20 |