Os06g0683800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0683800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 564.75 | 1.12 | 8.44 | -2.26 | 4.31 | -2.41 | 0.566 | -4.89 | -1.43 | 6.68 | 20.98 | 1376 | 20.5 | -- |
| 588.07 | 1.13 | 8.27 | -1.44 | 4.59 | -1.45 | 0.947 | -- | -1.22 | 6.85 | 21 | 1498 | 23.4 | -- |
| 564.72 | 1.11 | 8.44 | -2.26 | 4.22 | -2.59 | -- | -5.33 | -1.43 | 6.58 | 20.9 | 1336 | 20.1 | -- |
| 589.15 | 1.13 | 8.29 | -1.51 | 4.64 | -1.31 | -- | -- | -1.24 | 6.79 | 20.9 | 1518 | 0.993 | -- |
| 640.91 | 1.18 | 8.52 | -2.09 | -- | -4.5 | -- | -1.39 | -1.65 | -- | -19.95 | 2646 | 21.2 | -- |
| 640.27 | 1.19 | 8.38 | -2.1 | 4.46 | -- | 1.06 | -- | -1.62 | 6.86 | -- | -- | -- | -- |
| 643.09 | 1.19 | 8.38 | -2.09 | 4.47 | -- | -- | -- | -1.62 | 6.83 | -- | -- | -- | -- |
| 643.09 | 1.18 | 8.49 | -2.09 | -- | -4.46 | -- | -- | -1.62 | -- | -19.84 | 2653 | 21.3 | -- |
| 600.55 | 1.14 | 8.19 | -- | 4.46 | -1.75 | -- | -- | -0.75 | 6.79 | 21.3 | 46040 | 1.38 | -- |
| 1688.01 | 1.92 | 8.47 | -1.99 | -- | -- | -- | -- | -1.54 | -- | -- | -- | -- | -- |
| 757.75 | 1.29 | 8.33 | -- | 4.44 | -- | -- | -- | -1.39 | 6.86 | -- | -- | -- | -- |
| 757.75 | 1.28 | 8.44 | -- | -- | -4.44 | -- | -- | -1.39 | -- | -33.6 | 2657 | 21.3 | -- |
| 1792.27 | 1.98 | 8.42 | -- | -- | -- | -- | -- | -1.32 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 549.45 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 2 | 554.89 | humidity | 50 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 3 | 554.92 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 13 |
| 6 | 555.11 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 8 | 556.00 | humidity | 50 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 16 | 556.39 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 26 | 558.46 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 7 |
| 27 | 558.66 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 30 | 558.98 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 32 | 559.25 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 36 | 559.38 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 39 | 559.62 | wind | 1 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 42 | 559.93 | wind | 1 | 43200 | < th | dose dependent | rect. | 9 | 5 |
| 49 | 560.24 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 17 |
| 56 | 560.45 | wind | 1 | 14400 | < th | dose dependent | rect. | 23 | 9 |
| 59 | 560.57 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 64 | 560.73 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 19 |
| 65 | 560.74 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 69 | 560.82 | humidity | 90 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 88 | 561.29 | wind | 3 | 14400 | < th | dose dependent | rect. | 18 | 20 |
| 107 | 561.71 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 117 | 561.88 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 11 |
| 124 | 561.97 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 3 |
| 130 | 562.09 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 140 | 562.33 | wind | 3 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 143 | 562.34 | wind | 3 | 14400 | < th | dose dependent | sin | 4 | NA |
| 181 | 563.04 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 182 | 563.04 | wind | 1 | 43200 | < th | dose dependent | rect. | 22 | 13 |
| 193 | 563.13 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 215 | 563.41 | wind | 3 | 14400 | < th | dose dependent | sin | 11 | NA |
| 241 | 563.63 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 20 |
| 242 | 563.71 | wind | 1 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 243 | 563.72 | wind | 3 | 14400 | < th | dose dependent | rect. | 10 | 22 |
| 268 | 563.99 | wind | 3 | 14400 | < th | dose independent | rect. | 17 | 14 |
| 293 | 564.28 | humidity | 90 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 307 | 564.46 | wind | 1 | 43200 | < th | dose independent | sin | 8 | NA |
| 326 | 564.66 | wind | 3 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 335 | 564.76 | wind | 3 | 14400 | < th | dose independent | rect. | 23 | 16 |
| 337 | 564.78 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 20 |
| 359 | 564.96 | wind | 3 | 14400 | < th | dose dependent | no | NA | NA |
| 374 | 565.07 | humidity | 90 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 431 | 565.53 | wind | 1 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 434 | 565.54 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 17 |
| 459 | 565.71 | wind | 3 | 14400 | < th | dose dependent | rect. | 7 | 23 |
| 460 | 565.74 | wind | 3 | 14400 | < th | dose independent | sin | 5 | NA |
| 468 | 565.77 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 489 | 565.92 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 12 |
| 515 | 566.08 | wind | 3 | 14400 | < th | dose dependent | rect. | 2 | 23 |
| 526 | 566.15 | wind | 1 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 595 | 566.55 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 23 |
| 629 | 566.74 | wind | 3 | 14400 | > th | dose independent | sin | 5 | NA |
| 653 | 566.91 | wind | 1 | 14400 | > th | dose independent | rect. | 8 | 23 |
| 680 | 567.05 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 20 |
| 685 | 567.08 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 16 |
| 717 | 567.22 | wind | 3 | 14400 | > th | dose independent | sin | 11 | NA |
| 732 | 567.30 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 14 |
| 802 | 567.67 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 5 |
| 804 | 567.68 | wind | 1 | 14400 | > th | dose independent | no | NA | NA |
| 806 | 567.68 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 824 | 567.77 | wind | 1 | 14400 | > th | dose independent | sin | 1 | NA |
| 826 | 567.79 | wind | 1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 838 | 567.83 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 943 | 568.21 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 16 |
| 988 | 568.38 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 14 |