Os06g0683500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribonuclease H domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0683500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ribonuclease H domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 270.84 | 0.773 | 4.62 | 2.78 | 0.915 | 0.558 | 1.04 | -1.53 | 0.777 | 16.1 | 18.9 | 16179 | -- | -- |
| 270.35 | 0.766 | 4.69 | 2.82 | 0.906 | 1.14 | 0.903 | -- | 0.735 | 16.1 | 17.4 | 16387 | -- | -- |
| 273.73 | 0.771 | 4.62 | 2.8 | 0.918 | 0.572 | -- | -1.5 | 0.777 | 16.3 | 18.9 | 16190 | -- | -- |
| 273.12 | 0.77 | 4.69 | 2.86 | 0.921 | 1.19 | -- | -- | 0.747 | 16.4 | 17.2 | 16391 | -- | -- |
| 319.79 | 0.833 | 4.6 | 2.81 | -- | 0.596 | -- | -1.52 | 0.787 | -- | 19.3 | 15644 | -- | -- |
| 287.08 | 0.794 | 4.76 | 1.91 | 0.915 | -- | 1.09 | -- | 0.456 | 16.1 | -- | -- | -- | -- |
| 290.24 | 0.798 | 4.76 | 1.93 | 0.928 | -- | -- | -- | 0.462 | 16.3 | -- | -- | -- | -- |
| 319.28 | 0.832 | 4.69 | 2.86 | -- | 1.18 | -- | -- | 0.742 | -- | 17.3 | 17083 | -- | -- |
| 387.22 | 0.921 | 4.81 | -- | 0.888 | -0.319 | -- | -- | 0.24 | 16.4 | 17.2 | 16391 | -- | -- |
| 336.61 | 0.857 | 4.75 | 1.89 | -- | -- | -- | -- | 0.437 | -- | -- | -- | -- | -- |
| 388.01 | 0.921 | 4.81 | -- | 0.892 | -- | -- | -- | 0.247 | 16.4 | -- | -- | -- | -- |
| 384.8 | 0.914 | 4.86 | -- | -- | -1.07 | -- | -- | -0.0321 | -- | 18.59 | 47520 | -- | -- |
| 430.76 | 0.969 | 4.8 | -- | -- | -- | -- | -- | 0.227 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 267.25 | wind | 5.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 2 | 267.25 | wind | 5.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 9 | 267.71 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 11 | 267.89 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 12 | 267.89 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 18 | 268.11 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 19 | 268.14 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 20 | 268.15 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 23 | 268.18 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 30 | 268.28 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 17 |
| 31 | 268.28 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 50 | 268.35 | wind | 5.0 | 43200 | > th | dose independent | rect. | 16 | 19 |
| 55 | 268.38 | wind | 9.0 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 79 | 268.47 | wind | 5.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 85 | 268.48 | wind | 5.0 | 43200 | > th | dose independent | rect. | 2 | 10 |
| 90 | 268.48 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 94 | 268.49 | wind | 5.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 103 | 268.52 | wind | 5.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 104 | 268.52 | wind | 5.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 112 | 268.54 | wind | 5.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 115 | 268.54 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 17 |
| 116 | 268.55 | wind | 5.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 126 | 268.56 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 17 | 20 |
| 156 | 268.61 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 17 | 17 |
| 160 | 268.62 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 15 | 16 |
| 164 | 268.63 | wind | 3.0 | 43200 | > th | dose dependent | sin | 11 | NA |
| 188 | 268.67 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 10 |
| 189 | 268.67 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 14 |
| 195 | 268.68 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 209 | 268.71 | wind | 9.0 | 43200 | < th | dose independent | rect. | 15 | 17 |
| 211 | 268.71 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 214 | 268.72 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 219 | 268.72 | wind | 3.0 | 43200 | > th | dose dependent | sin | 6 | NA |
| 220 | 268.72 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 221 | 268.72 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 224 | 268.72 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 1 | 12 |
| 225 | 268.72 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 229 | 268.73 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 235 | 268.73 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 8 |
| 248 | 268.76 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 251 | 268.76 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 253 | 268.77 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 11 |
| 263 | 268.77 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 267 | 268.78 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 303 | 268.83 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 307 | 268.83 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 331 | 268.86 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 351 | 268.87 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 439 | 268.96 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 472 | 268.99 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 7 |
| 486 | 269.01 | wind | 7.0 | 43200 | < th | dose dependent | sin | 5 | NA |
| 495 | 269.01 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 20 | 17 |
| 499 | 269.02 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 500 | 269.02 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 530 | 269.04 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 531 | 269.04 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 2 | 4 |
| 547 | 269.05 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 563 | 269.05 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 11 |
| 675 | 269.12 | wind | 9.0 | 43200 | > th | dose independent | sin | 13 | NA |
| 713 | 269.14 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 7 |
| 773 | 269.17 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 4 |
| 793 | 269.18 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 828 | 269.20 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 830 | 269.20 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 861 | 269.21 | temperature | 10.0 | 43200 | > th | dose dependent | sin | 23 | NA |
| 892 | 269.22 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |