Os06g0683300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-glucosidase.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0683300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Beta-glucosidase.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.61 | 0.494 | 10.4 | -3.07 | 0.151 | 1.62 | -0.824 | -1.58 | -0.554 | 21.6 | 12.25 | 1263 | -- | -- |
| 112.66 | 0.494 | 10.3 | -2.73 | 0.141 | 1.6 | -0.886 | -- | -0.463 | 21.8 | 12.63 | 1245 | -- | -- |
| 112.69 | 0.494 | 10.4 | -3.11 | 0.087 | 1.65 | -- | -1.93 | -0.571 | 22.9 | 10.93 | 1150 | -- | -- |
| 115.54 | 0.501 | 10.3 | -2.7 | 0.18 | 1.57 | -- | -- | -0.462 | 23.1 | 14.6 | 1297 | -- | -- |
| 113.03 | 0.495 | 10.4 | -3.11 | -- | 1.67 | -- | -2 | -0.57 | -- | 11.72 | 1100 | -- | -- |
| 154.4 | 0.583 | 10.3 | -2.24 | 0.294 | -- | -0.651 | -- | -0.18 | 23.7 | -- | -- | -- | -- |
| 156.09 | 0.585 | 10.3 | -2.21 | 0.301 | -- | -- | -- | -0.178 | 0.386 | -- | -- | -- | -- |
| 116.36 | 0.502 | 10.3 | -2.7 | -- | 1.64 | -- | -- | -0.465 | -- | 14.6 | 1141 | -- | -- |
| 280.36 | 0.78 | 10.2 | -- | 0.161 | 0.423 | -- | -- | -0.0507 | 22.2 | 21.81 | 1109 | -- | -- |
| 161.77 | 0.594 | 10.3 | -2.2 | -- | -- | -- | -- | -0.173 | -- | -- | -- | -- | -- |
| 285.37 | 0.79 | 10.2 | -- | 0.27 | -- | -- | -- | 0.0684 | 24 | -- | -- | -- | -- |
| 279.58 | 0.779 | 10.2 | -- | -- | 0.445 | -- | -- | 0.146 | -- | 33.3 | 1059 | -- | -- |
| 289.97 | 0.795 | 10.2 | -- | -- | -- | -- | -- | 0.0711 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.54 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 9 | 111.32 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 18 |
| 10 | 111.33 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 29 | 111.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 20 |
| 79 | 111.53 | temperature | 15 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 150 | 111.65 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 151 | 111.66 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 153 | 111.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 163 | 111.67 | temperature | 15 | 1440 | > th | dose dependent | sin | 17 | NA |
| 179 | 111.68 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 399 | 111.96 | temperature | 15 | 1440 | > th | dose dependent | sin | 0 | NA |
| 573 | 112.25 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 18 |
| 854 | 112.78 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 880 | 112.81 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 891 | 112.83 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 23 |
| 942 | 112.91 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 5 |