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Os06g0681600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Haem peroxidase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.93 (0.0568) R2 : 0.636
β1 : -5.44 (0.208) R2dD : 0.568 R2D : 0.467
β2 : 1.28 (0.148) R2dC : 0.0604 R2C : 0.0479
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.17 (0.121) R2dN8 : 0.1 R2N8 : 0.000962
σ : 1.07
deviance : 519.65
__
_____
C
peak time of C : 17.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
486.84 1.04 8 -5.15 1.25 6.74 -2.31 22.3 -1.15 17.3 9.752 293 -- --
494.12 1.04 7.91 -5.22 1.19 3.54 -2.77 -- -1.15 17.9 10.61 226 -- --
499.14 1.04 8 -5.13 1.22 7.2 -- 22.8 -1.15 17.4 10.15 303 -- --
499.27 1.04 7.92 -5.34 1.2 3.02 -- -- -1.13 17.5 10.49 226 -- --
575.07 1.12 7.98 -5.11 -- 8.26 -- 24 -1.15 -- 10.2 290 -- --
504.65 1.05 7.92 -5.44 1.3 -- -2.46 -- -1.16 17.4 -- -- -- --
519.65 1.07 7.93 -5.44 1.28 -- -- -- -1.17 17.5 -- -- -- --
572.6 1.11 7.9 -5.34 -- 3.78 -- -- -1.15 -- 10.48 237 -- --
1138.7 1.57 7.74 -- 1.32 3.61 -- -- -0.334 16.9 6.6 1837 -- --
605.37 1.15 7.91 -5.48 -- -- -- -- -1.2 -- -- -- -- --
1299.09 1.69 7.8 -- 1.37 -- -- -- -0.565 17.3 -- -- -- --
909.23 1.4 7.76 -- -- 3.58 -- -- -0.382 -- 5.978 46403 -- --
1397.72 1.75 7.78 -- -- -- -- -- -0.594 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 470.46 wind 1.0 14400 < th dose independent rect. 1 2
2 472.32 humidity 90.0 14400 < th dose independent rect. 1 5
4 473.69 wind 1.0 14400 > th dose independent rect. 1 2
7 475.65 atmosphere 1005.0 30 > th dose independent rect. 3 6
8 475.98 temperature 15.0 720 > th dose dependent rect. 6 1
14 476.42 radiation 40.0 720 < th dose independent rect. 1 8
15 477.12 atmosphere 1000.0 30 > th dose dependent rect. 3 6
19 477.41 temperature 10.0 270 > th dose dependent rect. 1 16
28 477.79 temperature 20.0 270 > th dose independent rect. 1 16
31 478.01 humidity 90.0 14400 > th dose independent rect. 4 2
33 478.19 temperature 10.0 720 > th dose dependent rect. 1 8
53 479.04 atmosphere 1000.0 30 > th dose dependent rect. 1 8
54 479.07 humidity 90.0 14400 < th dose independent rect. 1 2
70 479.86 atmosphere 995.0 90 > th dose dependent rect. 9 14
83 480.23 radiation 40.0 720 < th dose independent rect. 17 16
84 480.27 atmosphere 995.0 30 > th dose dependent rect. 9 18
97 480.55 humidity 50.0 30 > th dose independent rect. 12 21
117 480.81 temperature 20.0 720 > th dose independent rect. 3 6
120 480.83 humidity 90.0 14400 > th dose independent rect. 1 5
141 481.22 temperature 15.0 30 > th dose independent rect. 9 16
143 481.25 temperature 20.0 10 > th dose independent rect. 12 8
149 481.39 temperature 20.0 90 > th dose independent rect. 12 7
169 481.71 humidity 80.0 14400 > th dose dependent rect. 3 3
173 481.76 temperature 30.0 30 < th dose independent rect. 18 9
176 481.82 atmosphere 995.0 90 > th dose dependent rect. 18 9
179 481.86 temperature 10.0 90 > th dose dependent rect. 19 8
191 482.12 wind 1.0 270 > th dose independent rect. 1 16
194 482.14 atmosphere 1000.0 90 > th dose independent rect. 3 15
199 482.19 atmosphere 995.0 30 > th dose dependent rect. 9 16
200 482.22 atmosphere 1015.0 270 < th dose dependent rect. 10 8
205 482.25 humidity 60.0 10 > th dose independent rect. 3 16
206 482.26 atmosphere 995.0 30 > th dose dependent rect. 9 3
207 482.27 radiation 20.0 10 < th dose independent rect. 3 15
211 482.28 radiation 1.0 90 < th dose dependent rect. 5 22
215 482.39 temperature 10.0 720 > th dose dependent rect. 21 12
216 482.43 temperature 20.0 270 < th dose independent rect. 5 4
217 482.43 wind 1.0 43200 < th dose dependent rect. 2 1
223 482.47 temperature 15.0 10 > th dose independent rect. 20 16
224 482.47 temperature 25.0 270 < th dose dependent rect. 6 3
226 482.48 temperature 25.0 270 < th dose dependent rect. 5 5
227 482.50 atmosphere 995.0 30 > th dose independent rect. 12 21
234 482.62 temperature 10.0 1440 > th dose independent rect. 10 3
237 482.62 atmosphere 995.0 1440 > th dose independent rect. 10 3
238 482.62 temperature 10.0 1440 > th dose independent rect. 13 21
241 482.62 humidity 80.0 14400 > th dose dependent rect. 1 5
242 482.65 humidity 90.0 14400 > th dose independent rect. 1 2
248 482.70 temperature 15.0 10 > th dose dependent rect. 20 7
255 482.80 radiation 1.0 30 > th dose independent rect. 9 3
257 482.85 temperature 10.0 30 > th dose independent rect. 9 3
259 482.85 atmosphere 995.0 30 > th dose independent rect. 9 3
260 482.85 atmosphere 1015.0 30 < th dose independent rect. 9 3
261 482.85 precipitation 0.1 30 < th dose independent rect. 9 3
263 482.85 temperature 10.0 30 > th dose independent rect. 12 21
264 482.85 precipitation 0.1 30 < th dose dependent rect. 9 3
265 482.88 radiation 30.0 90 < th dose independent rect. 23 10
267 482.90 radiation 20.0 90 < th dose independent rect. 3 15
268 482.90 wind 1.0 14400 < th dose dependent rect. 1 3
282 483.04 wind 1.0 270 > th dose independent rect. 23 8
284 483.04 temperature 10.0 270 > th dose dependent rect. 18 6
286 483.07 temperature 25.0 270 > th dose independent rect. 8 9
289 483.09 humidity 70.0 14400 < th dose independent rect. 21 10
290 483.11 radiation 20.0 90 < th dose independent rect. 1 17
294 483.15 temperature 20.0 720 > th dose independent rect. 6 1
298 483.18 temperature 15.0 30 > th dose independent rect. 9 18
304 483.20 radiation 30.0 90 < th dose independent rect. 1 8
306 483.20 temperature 25.0 270 < th dose dependent rect. 5 12
317 483.28 radiation 20.0 10 < th dose independent rect. 1 18
318 483.30 atmosphere 1010.0 270 < th dose independent rect. 10 8
322 483.31 humidity 50.0 10 > th dose independent rect. 12 8
335 483.38 temperature 15.0 30 > th dose dependent rect. 6 14
337 483.41 atmosphere 1015.0 30 < th dose independent rect. 12 21
341 483.42 atmosphere 995.0 43200 < th dose dependent rect. 18 5
350 483.46 atmosphere 995.0 43200 < th dose dependent rect. 17 8
354 483.48 wind 1.0 30 > th dose independent rect. 9 3
369 483.57 radiation 20.0 10 < th dose independent rect. 21 23
383 483.65 wind 7.0 720 > th dose dependent rect. 22 12
385 483.67 temperature 30.0 270 < th dose dependent rect. 5 8
395 483.71 radiation 1.0 270 < th dose dependent rect. 6 17
396 483.72 atmosphere 995.0 43200 < th dose independent rect. 18 8
397 483.72 precipitation 0.1 30 < th dose independent rect. 12 21
399 483.72 precipitation 0.1 30 < th dose dependent rect. 12 21
406 483.75 temperature 25.0 720 < th dose dependent rect. 5 1
414 483.82 temperature 10.0 270 > th dose dependent rect. 10 8
428 483.89 humidity 70.0 90 > th dose independent rect. 1 8
444 483.94 radiation 1.0 270 < th dose dependent rect. 5 20
448 483.96 atmosphere 995.0 43200 > th dose independent rect. 18 9
454 483.99 wind 9.0 30 < th dose independent rect. 9 3
467 484.04 radiation 20.0 10 < th dose independent sin 5 NA
472 484.06 radiation 20.0 10 < th dose independent rect. 1 9
481 484.10 atmosphere 995.0 43200 < th dose dependent rect. 16 10
493 484.15 radiation 20.0 10 < th dose independent rect. 13 21
520 484.24 atmosphere 995.0 270 > th dose dependent rect. 7 14
538 484.35 temperature 10.0 10 > th dose dependent rect. 12 8
544 484.38 radiation 1.0 1440 < th dose dependent rect. 19 9
552 484.43 temperature 10.0 1440 > th dose independent rect. 19 9
555 484.43 temperature 30.0 1440 < th dose independent rect. 19 9
559 484.43 humidity 50.0 1440 > th dose independent rect. 19 9
561 484.43 atmosphere 995.0 1440 > th dose independent rect. 19 9
562 484.43 radiation 1.0 1440 < th dose independent rect. 19 9
582 484.43 temperature 10.0 1440 > th dose independent rect. 4 15
591 484.45 wind 3.0 720 > th dose independent rect. 21 12
622 484.54 humidity 60.0 90 > th dose independent rect. 18 9
624 484.54 wind 9.0 30 < th dose independent rect. 12 21
633 484.57 humidity 70.0 90 > th dose independent rect. 23 10
635 484.58 atmosphere 1010.0 10 < th dose independent rect. 12 8
638 484.58 humidity 80.0 14400 > th dose dependent rect. 1 1
648 484.61 temperature 25.0 720 < th dose dependent rect. 1 8
655 484.65 precipitation 0.1 90 < th dose independent rect. 19 17
657 484.65 precipitation 0.1 90 < th dose dependent rect. 19 17
664 484.67 radiation 1.0 90 < th dose independent rect. 5 22
665 484.68 radiation 20.0 10 < th dose independent rect. 3 7
672 484.70 temperature 10.0 1440 > th dose independent rect. 13 6
677 484.70 temperature 10.0 1440 > th dose independent rect. 19 18
680 484.70 atmosphere 995.0 1440 > th dose independent rect. 19 18
686 484.71 temperature 30.0 720 < th dose dependent rect. 1 5
700 484.76 wind 3.0 720 > th dose independent rect. 21 14
702 484.76 humidity 60.0 10 > th dose independent rect. 1 18
705 484.80 radiation 1.0 270 < th dose dependent sin 20 NA
707 484.81 precipitation 0.1 10 < th dose independent rect. 20 16
710 484.81 precipitation 0.1 10 < th dose dependent rect. 20 16
719 484.86 temperature 10.0 1440 > th dose independent rect. 2 8
722 484.86 atmosphere 995.0 1440 > th dose independent rect. 2 8
723 484.86 temperature 15.0 90 > th dose independent rect. 18 9
724 484.86 temperature 10.0 1440 > th dose independent rect. 10 16
734 484.89 wind 9.0 10 < th dose independent rect. 9 16
736 484.90 temperature 20.0 720 < th dose independent rect. 3 7
739 484.91 radiation 1.0 90 < th dose dependent rect. 18 9
741 484.92 temperature 15.0 10 > th dose dependent rect. 20 5
750 484.94 humidity 90.0 10 < th dose independent rect. 12 8
755 484.95 humidity 60.0 720 > th dose independent rect. 1 8
759 484.95 temperature 10.0 30 > th dose dependent rect. 1 8
760 484.96 atmosphere 995.0 43200 > th dose independent rect. 20 2
762 484.96 atmosphere 995.0 90 > th dose independent rect. 12 7
774 484.99 radiation 1.0 270 > th dose independent rect. 11 8
789 485.00 temperature 20.0 720 < th dose independent rect. 5 1
815 485.11 wind 9.0 4320 > th dose dependent rect. 15 1
817 485.12 atmosphere 1005.0 90 > th dose independent rect. 9 14
821 485.13 wind 3.0 720 < th dose independent rect. 22 13
833 485.16 atmosphere 995.0 43200 > th dose independent rect. 23 1
837 485.17 atmosphere 995.0 43200 < th dose independent rect. 21 1
850 485.17 atmosphere 995.0 43200 < th dose dependent rect. 21 1
866 485.18 radiation 40.0 30 < th dose independent rect. 12 21
868 485.19 atmosphere 995.0 10 > th dose independent rect. 12 8
874 485.21 radiation 40.0 43200 < th dose dependent rect. 19 9
878 485.22 temperature 10.0 30 > th dose independent rect. 1 8
880 485.22 temperature 30.0 30 < th dose independent rect. 1 8
881 485.22 humidity 50.0 30 > th dose independent rect. 1 8
884 485.22 atmosphere 1015.0 30 < th dose independent rect. 1 8
893 485.24 wind 9.0 4320 > th dose independent rect. 15 1
899 485.25 wind 9.0 30 < th dose independent rect. 1 8
901 485.26 precipitation 0.1 30 < th dose independent rect. 9 16
904 485.26 precipitation 0.1 30 < th dose dependent rect. 9 16
922 485.32 temperature 10.0 90 > th dose independent rect. 12 7
928 485.32 atmosphere 995.0 90 > th dose independent rect. 19 17
936 485.34 atmosphere 1015.0 10 < th dose dependent rect. 12 8
942 485.35 temperature 10.0 10 > th dose independent rect. 12 8
946 485.35 atmosphere 995.0 10 > th dose independent rect. 20 16
947 485.36 wind 3.0 720 > th dose independent rect. 2 3
948 485.36 humidity 50.0 30 > th dose independent rect. 9 3
957 485.38 humidity 70.0 30 > th dose independent rect. 3 6
958 485.38 precipitation 0.1 10 < th dose independent rect. 12 8
962 485.38 precipitation 0.1 10 < th dose dependent rect. 12 8
966 485.39 humidity 70.0 90 < th dose dependent rect. 19 16
969 485.41 temperature 20.0 30 > th dose independent rect. 20 5
974 485.42 temperature 25.0 270 > th dose independent rect. 13 3
977 485.42 radiation 20.0 90 < th dose independent rect. 23 20
980 485.43 temperature 25.0 270 > th dose independent sin 1 NA
991 485.45 radiation 1.0 90 < th dose independent rect. 18 9