Os06g0680700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0680700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cytochrome P450 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 377.03 | 0.912 | 3.85 | -0.849 | 0.89 | 1.04 | -0.872 | -3.52 | -0.299 | 5.96 | 1.001 | 157 | -- | -- |
| 383.91 | 0.913 | 3.89 | -0.897 | 0.863 | 0.826 | -0.391 | -- | -0.326 | 5.98 | 1.1 | 182 | -- | -- |
| 378.45 | 0.906 | 3.86 | -0.82 | 0.897 | 1.03 | -- | -3.03 | -0.294 | 5.86 | 1.1 | 153 | -- | -- |
| 384.19 | 0.913 | 3.89 | -0.937 | 0.846 | 0.765 | -- | -- | -0.308 | 5.87 | 1.092 | 182 | -- | -- |
| 412.48 | 0.946 | 3.88 | -0.974 | -- | 0.391 | -- | -2.45 | -0.253 | -- | 0.7016 | 151 | -- | -- |
| 389.88 | 0.926 | 3.88 | -1.03 | 0.673 | -- | -0.564 | -- | -0.259 | 6.12 | -- | -- | -- | -- |
| 390.65 | 0.926 | 3.88 | -1.04 | 0.67 | -- | -- | -- | -0.258 | 6.04 | -- | -- | -- | -- |
| 413.61 | 0.951 | 3.89 | -1.03 | -- | -0.165 | -- | -- | -0.237 | -- | 0.6479 | 289 | -- | -- |
| 403.82 | 0.936 | 3.87 | -- | 1 | 1.01 | -- | -- | -0.24 | 5.81 | 1.332 | 181 | -- | -- |
| 413.95 | 0.951 | 3.89 | -1.02 | -- | -- | -- | -- | -0.242 | -- | -- | -- | -- | -- |
| 419.16 | 0.958 | 3.86 | -- | 0.655 | -- | -- | -- | -0.142 | 6.12 | -- | -- | -- | -- |
| 439.37 | 0.976 | 3.9 | -- | -- | 0.329 | -- | -- | -0.179 | -- | 0.3 | 340 | -- | -- |
| 441.43 | 0.981 | 3.87 | -- | -- | -- | -- | -- | -0.129 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 371.41 | wind | 5.0 | 90 | > th | dose independent | rect. | 8 | 3 |
| 4 | 372.78 | wind | 7.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 7 | 372.97 | wind | 5.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 13 | 373.45 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 22 | 374.28 | wind | 5.0 | 30 | < th | dose dependent | rect. | 1 | 17 |
| 26 | 374.68 | wind | 5.0 | 30 | < th | dose independent | rect. | 1 | 17 |
| 31 | 375.08 | wind | 5.0 | 30 | < th | dose dependent | rect. | 1 | 14 |
| 64 | 376.05 | wind | 1.0 | 90 | < th | dose independent | rect. | 10 | 18 |
| 72 | 376.26 | wind | 1.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 76 | 376.34 | wind | 5.0 | 30 | > th | dose independent | rect. | 9 | 5 |
| 83 | 376.44 | wind | 5.0 | 10 | < th | dose independent | rect. | 1 | 14 |
| 92 | 376.53 | wind | 5.0 | 90 | > th | dose independent | rect. | 1 | 10 |
| 99 | 376.62 | wind | 5.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 113 | 376.86 | wind | 5.0 | 30 | > th | dose independent | rect. | 1 | 13 |
| 120 | 376.92 | wind | 3.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 123 | 376.95 | wind | 1.0 | 90 | < th | dose independent | rect. | 7 | 22 |
| 128 | 377.01 | wind | 5.0 | 90 | > th | dose dependent | rect. | 1 | 10 |
| 134 | 377.15 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 144 | 377.15 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 165 | 377.26 | wind | 1.0 | 90 | < th | dose independent | sin | 15 | NA |
| 172 | 377.29 | wind | 3.0 | 270 | < th | dose dependent | rect. | 9 | 18 |
| 179 | 377.35 | wind | 1.0 | 90 | < th | dose independent | rect. | 24 | 3 |
| 188 | 377.39 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 191 | 377.41 | wind | 3.0 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 192 | 377.42 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 11 |
| 198 | 377.46 | wind | 9.0 | 90 | > th | dose dependent | rect. | 21 | 13 |
| 204 | 377.49 | wind | 3.0 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 208 | 377.51 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 227 | 377.64 | wind | 5.0 | 30 | > th | dose independent | sin | 4 | NA |
| 237 | 377.70 | temperature | 30.0 | 10 | < th | dose independent | rect. | 11 | 23 |
| 240 | 377.72 | wind | 3.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 242 | 377.73 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 1 | 1 |
| 250 | 377.77 | wind | 3.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 270 | 377.86 | wind | 3.0 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 278 | 377.90 | wind | 7.0 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 280 | 377.92 | wind | 1.0 | 90 | < th | dose independent | rect. | 16 | 12 |
| 285 | 377.96 | wind | 1.0 | 90 | < th | dose independent | rect. | 20 | 8 |
| 293 | 377.98 | wind | 1.0 | 90 | < th | dose dependent | rect. | 24 | 3 |
| 314 | 378.08 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 20 |
| 325 | 378.13 | wind | 9.0 | 90 | > th | dose independent | rect. | 21 | 13 |
| 327 | 378.13 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 22 |
| 334 | 378.16 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 8 |
| 336 | 378.17 | radiation | 1.0 | 90 | < th | dose independent | rect. | 9 | 6 |
| 338 | 378.17 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 9 | 6 |
| 344 | 378.19 | humidity | 80.0 | 90 | > th | dose independent | rect. | 8 | 16 |
| 385 | 378.31 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 388 | 378.31 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 13 | 13 |
| 393 | 378.33 | wind | 1.0 | 90 | > th | dose independent | no | NA | NA |
| 404 | 378.37 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 19 |
| 420 | 378.41 | humidity | 90.0 | 270 | > th | dose independent | rect. | 8 | 12 |
| 425 | 378.42 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 12 | 7 |
| 428 | 378.43 | humidity | 80.0 | 90 | > th | dose independent | rect. | 12 | 1 |
| 430 | 378.43 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 8 | 11 |
| 472 | 378.57 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 473 | 378.57 | humidity | 90.0 | 30 | > th | dose independent | rect. | 1 | 2 |
| 475 | 378.57 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 499 | 378.66 | wind | 5.0 | 30 | < th | dose independent | sin | 4 | NA |
| 502 | 378.66 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 8 | 11 |
| 512 | 378.68 | wind | 5.0 | 30 | < th | dose dependent | rect. | 20 | 22 |
| 522 | 378.72 | wind | 1.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 555 | 378.84 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 8 | 16 |
| 572 | 378.88 | radiation | 1.0 | 270 | < th | dose independent | sin | 23 | NA |
| 611 | 378.99 | humidity | 80.0 | 270 | < th | dose independent | rect. | 8 | 13 |
| 627 | 379.02 | wind | 1.0 | 90 | < th | dose independent | rect. | 24 | 23 |
| 653 | 379.08 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 1 | 6 |
| 660 | 379.10 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 670 | 379.13 | wind | 1.0 | 90 | < th | dose independent | rect. | 22 | 23 |
| 674 | 379.15 | temperature | 25.0 | 30 | > th | dose independent | rect. | 10 | 8 |
| 677 | 379.15 | wind | 1.0 | 90 | < th | dose independent | rect. | 16 | 23 |
| 691 | 379.18 | wind | 1.0 | 90 | < th | dose independent | rect. | 20 | 19 |
| 702 | 379.19 | wind | 7.0 | 30 | < th | dose dependent | sin | 4 | NA |
| 711 | 379.21 | wind | 1.0 | 90 | < th | dose independent | rect. | 22 | 17 |
| 722 | 379.22 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 10 | 4 |
| 743 | 379.23 | humidity | 90.0 | 10 | > th | dose independent | rect. | 1 | 5 |
| 749 | 379.23 | temperature | 25.0 | 270 | < th | dose independent | rect. | 5 | 12 |
| 761 | 379.23 | wind | 3.0 | 30 | < th | dose dependent | rect. | 17 | 22 |
| 768 | 379.25 | temperature | 25.0 | 270 | < th | dose independent | rect. | 8 | 9 |
| 777 | 379.26 | wind | 1.0 | 90 | < th | dose independent | no | NA | NA |
| 778 | 379.26 | humidity | 80.0 | 270 | < th | dose independent | sin | 23 | NA |
| 781 | 379.26 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 22 | 14 |
| 790 | 379.27 | radiation | 1.0 | 90 | < th | dose independent | rect. | 12 | 7 |
| 791 | 379.27 | wind | 5.0 | 30 | < th | dose independent | rect. | 7 | 11 |
| 813 | 379.30 | wind | 1.0 | 90 | < th | dose independent | rect. | 22 | 19 |
| 819 | 379.31 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 16 | 9 |
| 834 | 379.33 | humidity | 80.0 | 90 | > th | dose independent | rect. | 12 | 3 |
| 847 | 379.36 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 850 | 379.36 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 859 | 379.38 | wind | 1.0 | 90 | > th | dose independent | sin | 7 | NA |
| 884 | 379.41 | temperature | 30.0 | 10 | < th | dose independent | rect. | 18 | 18 |
| 935 | 379.48 | wind | 1.0 | 90 | < th | dose dependent | sin | 16 | NA |
| 947 | 379.50 | humidity | 80.0 | 270 | < th | dose independent | rect. | 5 | 16 |