Os06g0679800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heat shock protein Hsp70 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0679800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Heat shock protein Hsp70 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.07 | 0.231 | 10.8 | -0.296 | 0.605 | -1.27 | 0.297 | -1.58 | -0.0836 | 4.58 | 31.39 | 277 | -- | -- |
| 26.33 | 0.239 | 10.8 | -0.546 | 0.595 | -1.34 | -0.0862 | -- | -0.121 | 4.7 | 132.3 | 282 | -- | -- |
| 24.16 | 0.229 | 10.8 | -0.308 | 0.593 | -1.29 | -- | -1.5 | -0.0968 | 4.82 | 31.3 | 331 | -- | -- |
| 25.89 | 0.237 | 10.8 | -0.536 | 0.576 | -1.25 | -- | -- | -0.142 | 4.88 | 31.92 | 324 | -- | -- |
| 28 | 0.246 | 10.8 | -0.303 | -- | -1 | -- | -1.43 | -0.112 | -- | 30.4 | 1357 | -- | -- |
| 45.17 | 0.315 | 10.8 | -0.262 | 0.21 | -- | -0.336 | -- | 0.0663 | 4.55 | -- | -- | -- | -- |
| 45.48 | 0.316 | 10.8 | -0.26 | 0.207 | -- | -- | -- | 0.0681 | 4.46 | -- | -- | -- | -- |
| 29.55 | 0.253 | 10.8 | -0.58 | -- | -1.04 | -- | -- | -0.129 | -- | 32.33 | 1312 | -- | -- |
| 33.46 | 0.269 | 10.8 | -- | 0.508 | -1.08 | -- | -- | -0.0314 | 4.76 | 38.68 | 294 | -- | -- |
| 47.78 | 0.323 | 10.8 | -0.252 | -- | -- | -- | -- | 0.0735 | -- | -- | -- | -- | -- |
| 47.25 | 0.322 | 10.8 | -- | 0.203 | -- | -- | -- | 0.097 | 4.49 | -- | -- | -- | -- |
| 37.15 | 0.284 | 10.8 | -- | -- | -0.794 | -- | -- | -0.015 | -- | 39.43 | 1275 | -- | -- |
| 49.45 | 0.328 | 10.8 | -- | -- | -- | -- | -- | 0.101 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.33 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 23 |
| 3 | 24.40 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 4 | 24.43 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 5 | 24.43 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 10 | 24.61 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 11 | 24.63 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 19 | 24.90 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 30 | 25.08 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 32 | 25.09 | temperature | 15 | 1440 | > th | dose dependent | rect. | 19 | 17 |
| 37 | 25.11 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 18 |
| 57 | 25.15 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 21 |
| 62 | 25.17 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 12 |
| 87 | 25.23 | temperature | 20 | 1440 | > th | dose dependent | sin | 8 | NA |
| 97 | 25.25 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 98 | 25.26 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 139 | 25.33 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 146 | 25.34 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 170 | 25.38 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 192 | 25.41 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 194 | 25.42 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 195 | 25.42 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 5 |
| 198 | 25.42 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 8 |
| 204 | 25.43 | temperature | 10 | 1440 | > th | dose dependent | sin | 8 | NA |
| 212 | 25.44 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 6 |
| 302 | 25.56 | temperature | 30 | 1440 | < th | dose dependent | sin | 9 | NA |
| 348 | 25.59 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 664 | 25.90 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 712 | 25.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 743 | 25.96 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 744 | 25.96 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 760 | 25.97 | temperature | 30 | 1440 | < th | dose dependent | rect. | 10 | 23 |
| 769 | 25.98 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 816 | 26.01 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 22 |
| 828 | 26.02 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 926 | 26.08 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 938 | 26.08 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 966 | 26.10 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 982 | 26.12 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |