Os06g0678800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Pollen-specific protein NTP303 precursor.
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Os06g0678800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Pollen-specific protein NTP303 precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 543.47 | 1.1 | 3.87 | -2.96 | 0.358 | 0.982 | 0.27 | -8.58 | -0.476 | 7.72 | 1004 | 230 | -- | -- |
| 556.56 | 1.11 | 3.83 | -2.64 | 0.352 | -0.569 | 0.307 | -- | -0.546 | 7.9 | 1001 | 101 | -- | -- |
| 543.64 | 1.09 | 3.87 | -2.95 | 0.352 | 0.959 | -- | -8.45 | -0.479 | 7.91 | 1004 | 233 | -- | -- |
| 556.62 | 1.1 | 3.83 | -2.63 | 0.354 | -0.581 | -- | -- | -0.551 | 8.27 | 1001 | 83 | -- | -- |
| 550.58 | 1.09 | 3.87 | -2.93 | -- | 0.937 | -- | -8.42 | -0.467 | -- | 1004 | 230 | -- | -- |
| 559.61 | 1.11 | 3.83 | -2.69 | 0.353 | -- | 0.342 | -- | -0.526 | 7.79 | -- | -- | -- | -- |
| 559.83 | 1.11 | 3.82 | -2.68 | 0.352 | -- | -- | -- | -0.525 | 8.27 | -- | -- | -- | -- |
| 563.38 | 1.11 | 3.84 | -2.63 | -- | -0.584 | -- | -- | -0.542 | -- | 1001 | 85 | -- | -- |
| 734.8 | 1.26 | 3.77 | -- | 0.345 | -1.21 | -- | -- | -0.283 | 8.01 | 1001 | 88 | -- | -- |
| 566.68 | 1.11 | 3.83 | -2.68 | -- | -- | -- | -- | -0.521 | -- | -- | -- | -- | -- |
| 749.24 | 1.28 | 3.76 | -- | 0.342 | -- | -- | -- | -0.227 | 8.84 | -- | -- | -- | -- |
| 740.93 | 1.27 | 3.78 | -- | -- | -1.23 | -- | -- | -0.281 | -- | 1001 | 88 | -- | -- |
| 755.91 | 1.28 | 3.77 | -- | -- | -- | -- | -- | -0.224 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 533.44 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 2 | 534.33 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 10 | 10 |
| 8 | 535.57 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 6 |
| 9 | 535.87 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 10 | 535.95 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 10 | 1 |
| 11 | 536.35 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 14 | 536.69 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 14 | 17 |
| 17 | 536.79 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 26 | 537.11 | radiation | 30.0 | 30 | < th | dose independent | rect. | 11 | 15 |
| 32 | 537.33 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 13 |
| 47 | 537.66 | wind | 1.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 70 | 538.07 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 72 | 538.08 | atmosphere | 1005.0 | 270 | < th | dose dependent | sin | 22 | NA |
| 78 | 538.25 | wind | 3.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 83 | 538.32 | wind | 3.0 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 90 | 538.50 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 23 | 8 |
| 92 | 538.56 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 5 |
| 98 | 538.63 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 101 | 538.65 | wind | 1.0 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 103 | 538.67 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 110 | 538.70 | wind | 3.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 115 | 538.73 | wind | 3.0 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 132 | 538.90 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 11 |
| 138 | 538.95 | temperature | 20.0 | 90 | < th | dose independent | rect. | 7 | 2 |
| 154 | 539.05 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 170 | 539.13 | wind | 1.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 201 | 539.38 | wind | 1.0 | 43200 | < th | dose independent | rect. | 16 | 11 |
| 210 | 539.45 | wind | 1.0 | 14400 | < th | dose independent | rect. | 14 | 19 |
| 219 | 539.52 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 10 | 4 |
| 222 | 539.55 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 8 |
| 232 | 539.64 | wind | 1.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 246 | 539.72 | temperature | 25.0 | 270 | > th | dose independent | rect. | 13 | 20 |
| 258 | 539.79 | wind | 1.0 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 259 | 539.80 | atmosphere | 1005.0 | 720 | < th | dose dependent | rect. | 9 | 4 |
| 302 | 540.06 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 11 | 15 |
| 311 | 540.13 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 315 | 540.15 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 13 |
| 344 | 540.29 | atmosphere | 1005.0 | 720 | < th | dose dependent | rect. | 11 | 1 |
| 364 | 540.41 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 22 |
| 382 | 540.48 | wind | 1.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 405 | 540.59 | wind | 1.0 | 14400 | > th | dose independent | rect. | 14 | 19 |
| 409 | 540.60 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 20 |
| 427 | 540.68 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 444 | 540.73 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 446 | 540.75 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 479 | 540.84 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 517 | 540.94 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 23 |
| 560 | 541.01 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 562 | 541.01 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 8 |
| 569 | 541.03 | wind | 1.0 | 14400 | < th | dose dependent | no | NA | NA |
| 579 | 541.05 | wind | 3.0 | 43200 | < th | dose independent | rect. | 10 | 20 |
| 605 | 541.08 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 15 |
| 626 | 541.11 | wind | 3.0 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 688 | 541.22 | temperature | 25.0 | 270 | > th | dose independent | rect. | 13 | 13 |
| 706 | 541.24 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 15 |
| 716 | 541.25 | wind | 3.0 | 43200 | < th | dose dependent | sin | 0 | NA |
| 718 | 541.25 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 17 |
| 727 | 541.27 | wind | 3.0 | 43200 | > th | dose independent | rect. | 10 | 20 |
| 788 | 541.34 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 19 | 4 |
| 799 | 541.35 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 809 | 541.37 | wind | 1.0 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 822 | 541.39 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 831 | 541.40 | wind | 3.0 | 30 | > th | dose independent | rect. | 3 | 6 |
| 844 | 541.41 | wind | 1.0 | 43200 | > th | dose independent | rect. | 17 | 20 |
| 881 | 541.45 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 905 | 541.47 | wind | 3.0 | 43200 | < th | dose independent | sin | 0 | NA |
| 913 | 541.47 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 17 | 7 |