Os06g0678100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0678100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 122.06 | 0.519 | 9.16 | 0.671 | 1.15 | -2.52 | 0.233 | 0.446 | -0.289 | 11.2 | 15.78 | 358 | -- | -- |
| 122.22 | 0.515 | 9.17 | 0.613 | 1.14 | -2.49 | 0.253 | -- | -0.311 | 11.1 | 15.68 | 366 | -- | -- |
| 122.27 | 0.515 | 9.17 | 0.68 | 1.14 | -2.55 | -- | 0.422 | -0.29 | 11.2 | 15.6 | 365 | -- | -- |
| 122.4 | 0.515 | 9.17 | 0.617 | 1.14 | -2.54 | -- | -- | -0.303 | 11.2 | 15.45 | 367 | -- | -- |
| 163.32 | 0.595 | 9.16 | 0.915 | -- | -2.9 | -- | 0.756 | -0.182 | -- | 16.36 | 661 | -- | -- |
| 198.46 | 0.66 | 9.25 | 0.01 | 1.42 | -- | 0.656 | -- | -0.697 | 9.04 | -- | -- | -- | -- |
| 199.94 | 0.662 | 9.25 | 0.0334 | 1.41 | -- | -- | -- | -0.696 | 9.08 | -- | -- | -- | -- |
| 163.49 | 0.596 | 9.18 | 0.776 | -- | -2.91 | -- | -- | -0.222 | -- | 16.1 | 666 | -- | -- |
| 131.22 | 0.534 | 9.18 | -- | 1.13 | -2.26 | -- | -- | -0.4 | 11 | 16.02 | 365 | -- | -- |
| 315.11 | 0.829 | 9.28 | 0.0304 | -- | -- | -- | -- | -0.688 | -- | -- | -- | -- | -- |
| 199.97 | 0.661 | 9.25 | -- | 1.41 | -- | -- | -- | -0.7 | 9.08 | -- | -- | -- | -- |
| 177.71 | 0.621 | 9.21 | -- | -- | -2.56 | -- | -- | -0.343 | -- | 16.8 | 653 | -- | -- |
| 315.14 | 0.829 | 9.29 | -- | -- | -- | -- | -- | -0.691 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.44 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 2 | 123.48 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 17 |
| 6 | 123.69 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 8 | 123.74 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 9 | 123.79 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 12 | 124.07 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 15 | 124.20 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 16 | 124.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 19 | 124.25 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 8 |
| 32 | 124.42 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 10 |
| 34 | 124.44 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 36 | 124.46 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 49 | 124.53 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 12 |
| 58 | 124.57 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 76 | 124.63 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 10 |
| 100 | 124.73 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 12 |
| 124 | 124.80 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 165 | 124.88 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 22 |
| 174 | 124.90 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 202 | 124.98 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 220 | 125.04 | temperature | 30 | 1440 | < th | dose dependent | sin | 11 | NA |
| 281 | 125.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 338 | 125.50 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 342 | 125.52 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 363 | 125.60 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 446 | 125.92 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 476 | 126.06 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 568 | 126.42 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 572 | 126.43 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 624 | 126.70 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 632 | 126.73 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 963 | 128.24 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 969 | 128.27 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |