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Os06g0677300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : RINGv domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.016) R2 : 0.742
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.5 (0.0413) R2dC : 0.744 R2C : 0.741
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0415 (0.0337) R2dN8 : 0.0011 R2N8 : -0.00153
σ : 0.302
deviance : 41.74
__
_____
C
peak time of C : 4.39
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
26.86 0.243 11.4 -0.65 1.51 -1.61 -0.89 -5 -0.138 4.4 15 904 -- --
26.85 0.241 11.4 -0.715 1.5 0.769 -0.906 -- -0.139 4.4 15.4 905 -- --
28.91 0.25 11.4 -0.656 1.5 -1.48 -- -4.86 -0.135 4.39 15.2 988 -- --
28.96 0.251 11.4 -0.715 1.5 0.82 -- -- -0.136 4.4 15.35 991 -- --
149.34 0.569 11.4 -0.623 -- -1.16 -- -4.65 -0.103 -- 15.03 1032 -- --
29.13 0.253 11.4 -0.629 1.51 -- -0.946 -- -0.116 4.39 -- -- -- --
31.58 0.263 11.4 -0.621 1.51 -- -- -- -0.111 4.39 -- -- -- --
145.24 0.561 11.4 -0.732 -- 1 -- -- -0.147 -- 17.7 1042 -- --
41.3 0.299 11.4 -- 1.49 0.28 -- -- -0.0474 4.41 15.8 842 -- --
153.76 0.579 11.4 -0.562 -- -- -- -- -0.0707 -- -- -- -- --
41.74 0.302 11.4 -- 1.5 -- -- -- -0.0415 4.39 -- -- -- --
158.34 0.586 11.4 -- -- 0.629 -- -- -0.0487 -- 17.7 975 -- --
162.08 0.594 11.4 -- -- -- -- -- -0.0084 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 22.97 temperature 15.0 270 > th dose independent rect. 24 22
2 23.14 temperature 15.0 90 > th dose independent rect. 3 19
5 23.38 wind 7.0 90 < th dose independent rect. 3 19
7 23.53 temperature 10.0 90 > th dose dependent rect. 22 5
8 23.54 temperature 10.0 1440 > th dose independent rect. 23 5
11 23.54 temperature 30.0 1440 < th dose independent rect. 23 5
15 23.54 humidity 50.0 1440 > th dose independent rect. 23 5
24 23.54 atmosphere 995.0 1440 > th dose independent rect. 23 5
25 23.54 radiation 1.0 1440 < th dose independent rect. 23 5
45 23.54 temperature 10.0 1440 > th dose independent rect. 4 19
48 23.54 radiation 1.0 1440 < th dose dependent rect. 23 5
54 23.57 wind 1.0 90 > th dose independent rect. 22 5
61 23.61 atmosphere 995.0 90 > th dose dependent rect. 22 5
64 23.64 wind 1.0 270 > th dose independent rect. 22 2
65 23.66 radiation 40.0 43200 < th dose dependent rect. 23 5
66 23.66 temperature 25.0 270 > th dose dependent rect. 22 9
68 23.73 precipitation 0.1 90 < th dose independent rect. 22 5
70 23.73 precipitation 0.1 90 < th dose dependent rect. 22 5
71 23.75 wind 9.0 90 < th dose independent rect. 22 5
72 23.75 temperature 10.0 90 > th dose independent rect. 22 5
73 23.75 temperature 30.0 90 < th dose independent rect. 22 5
74 23.75 humidity 50.0 90 > th dose independent rect. 22 5
77 23.75 atmosphere 995.0 90 > th dose independent rect. 22 5
78 23.75 radiation 1.0 90 < th dose independent rect. 22 5
84 23.75 atmosphere 995.0 90 > th dose independent rect. 3 19
85 23.75 atmosphere 1015.0 90 < th dose independent rect. 3 19
86 23.75 radiation 1.0 90 < th dose dependent rect. 22 5
94 23.79 precipitation 0.1 90 < th dose independent rect. 3 19
95 23.79 precipitation 0.1 90 < th dose dependent rect. 3 19
96 23.80 wind 9.0 270 < th dose independent rect. 24 22
97 23.83 atmosphere 1005.0 90 > th dose independent rect. 22 5
98 23.85 temperature 10.0 270 > th dose dependent rect. 22 2
102 23.89 wind 9.0 1440 < th dose independent rect. 23 5
127 23.93 radiation 1.0 90 < th dose independent rect. 3 19
131 23.95 atmosphere 1015.0 90 < th dose independent rect. 22 5
136 23.98 atmosphere 995.0 270 > th dose dependent rect. 22 2
142 24.01 radiation 1.0 90 < th dose dependent rect. 3 19
145 24.03 humidity 90.0 270 < th dose independent rect. 22 2
178 24.12 wind 9.0 270 < th dose independent rect. 1 20
179 24.13 temperature 25.0 270 > th dose independent rect. 22 2
232 24.17 precipitation 0.1 270 < th dose independent rect. 22 2
233 24.17 precipitation 0.1 270 < th dose dependent rect. 22 2
240 24.20 wind 9.0 270 < th dose independent rect. 22 2
241 24.20 temperature 10.0 270 > th dose independent rect. 22 2
242 24.20 temperature 30.0 270 < th dose independent rect. 22 2
243 24.20 humidity 50.0 270 > th dose independent rect. 22 2
246 24.20 atmosphere 995.0 270 > th dose independent rect. 22 2
247 24.20 radiation 1.0 270 < th dose independent rect. 22 2
254 24.20 radiation 1.0 270 < th dose dependent rect. 22 2
281 24.31 humidity 50.0 30 > th dose dependent rect. 22 5
290 24.34 wind 9.0 10 < th dose dependent rect. 22 5
294 24.36 atmosphere 1015.0 270 < th dose independent rect. 22 2
299 24.36 wind 9.0 90 < th dose dependent rect. 22 5
303 24.38 wind 9.0 30 < th dose dependent rect. 3 19
340 24.43 temperature 25.0 270 > th dose dependent rect. 22 2
386 24.46 atmosphere 995.0 270 > th dose independent rect. 24 22
392 24.47 temperature 10.0 90 > th dose dependent rect. 3 19
393 24.48 atmosphere 1005.0 270 > th dose independent rect. 22 2
394 24.48 atmosphere 995.0 270 > th dose independent rect. 1 20
396 24.49 humidity 50.0 30 > th dose independent rect. 3 19
402 24.50 precipitation 0.1 270 < th dose independent rect. 24 22
404 24.50 precipitation 0.1 270 < th dose dependent rect. 24 22
420 24.55 atmosphere 1015.0 270 < th dose independent rect. 1 20
458 24.61 precipitation 0.1 270 < th dose independent rect. 1 20
462 24.61 precipitation 0.1 270 < th dose dependent rect. 1 20
506 24.69 wind 9.0 4320 < th dose independent rect. 4 3
553 24.71 temperature 10.0 1440 > th dose independent rect. 4 3
556 24.71 temperature 30.0 1440 < th dose independent rect. 4 3
560 24.71 humidity 50.0 1440 > th dose independent rect. 4 3
565 24.71 atmosphere 995.0 1440 > th dose independent rect. 4 3
566 24.71 atmosphere 1015.0 1440 < th dose independent rect. 4 3
567 24.71 radiation 40.0 1440 < th dose independent rect. 4 3
571 24.71 temperature 10.0 1440 > th dose independent rect. 7 21
575 24.71 temperature 30.0 270 < th dose dependent rect. 1 5
626 24.80 temperature 30.0 90 < th dose dependent rect. 3 3
651 24.81 wind 9.0 270 < th dose dependent rect. 22 2
693 24.87 humidity 50.0 270 > th dose dependent rect. 22 2
696 24.87 temperature 30.0 90 < th dose dependent rect. 3 6
699 24.88 wind 1.0 30 > th dose independent rect. 3 19
704 24.89 temperature 15.0 270 > th dose independent rect. 1 10
712 24.90 temperature 25.0 270 > th dose independent rect. 21 10
725 24.93 temperature 15.0 270 > th dose independent rect. 16 14
771 24.96 humidity 50.0 270 > th dose independent rect. 1 19
786 24.98 radiation 1.0 270 < th dose dependent rect. 1 19
812 25.04 wind 1.0 270 > th dose independent rect. 10 15
828 25.07 radiation 1.0 270 < th dose independent rect. 1 19
829 25.08 precipitation 0.1 30 < th dose independent rect. 6 21
831 25.08 precipitation 0.1 30 < th dose dependent rect. 6 21
836 25.10 wind 1.0 30 > th dose independent rect. 3 3
844 25.11 wind 5.0 30 < th dose independent rect. 3 3
853 25.12 wind 1.0 90 > th dose independent rect. 6 21
860 25.14 temperature 10.0 30 > th dose independent rect. 3 3
862 25.14 temperature 30.0 30 < th dose independent rect. 3 3
863 25.14 humidity 50.0 30 > th dose independent rect. 3 3
866 25.14 atmosphere 995.0 30 > th dose independent rect. 3 3
867 25.14 atmosphere 1010.0 30 < th dose independent rect. 3 3
869 25.14 radiation 20.0 30 < th dose independent rect. 3 3
872 25.14 precipitation 0.1 30 < th dose independent rect. 3 3
889 25.14 temperature 10.0 30 > th dose independent rect. 6 21
892 25.14 precipitation 0.1 30 < th dose dependent rect. 3 3
938 25.20 wind 7.0 270 < th dose independent rect. 1 10
959 25.22 radiation 1.0 90 < th dose independent rect. 3 7
970 25.23 radiation 1.0 90 < th dose independent rect. 3 5
978 25.24 temperature 15.0 90 > th dose independent rect. 3 8
979 25.24 temperature 15.0 30 > th dose independent rect. 16 14
994 25.26 radiation 40.0 30 < th dose dependent rect. 3 3