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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os06g0676500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.9 (0.0224) R2 : 0.015
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.124 (0.0472) R2dN8 : 0.0194 R2N8 : 0.015
σ : 0.423
deviance : 81.95
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
80.05 0.417 2.9 0.0764 0.000818 -0.353 -0.178 -4.96 0.139 5.46 9.6 7 -- --
80.08 0.417 2.9 0.0835 0.00562 1.29 -0.137 -- 0.136 7.86 9.603 7 -- --
80.13 0.417 2.9 0.0766 0.00165 -0.342 -- -4.82 0.138 16.8 9.6 6 -- --
80.13 0.417 2.9 0.0883 0.00947 1.32 -- -- 0.136 9.7 9.6 7 -- --
80.13 0.417 2.9 0.077 -- -0.318 -- -4.76 0.138 -- 9.643 7 -- --
81.79 0.424 2.9 0.0702 0.0101 -- 0.1 -- 0.132 17.8 -- -- -- --
81.8 0.424 2.9 0.0699 0.0175 -- -- -- 0.133 14.3 -- -- -- --
80.13 0.417 2.9 0.0873 -- 1.31 -- -- 0.138 -- 9.602 7 -- --
80.33 0.417 2.9 -- 0.00929 1.27 -- -- 0.128 11 10 7 -- --
81.82 0.423 2.9 0.0692 -- -- -- -- 0.132 -- -- -- -- --
81.93 0.423 2.9 -- 0.0162 -- -- -- 0.125 14.2 -- -- -- --
80.33 0.417 2.9 -- -- 1.27 -- -- 0.128 -- 10.06 8 -- --
81.95 0.423 2.9 -- -- -- -- -- 0.124 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 71.36 radiation 1.0 10 > th dose dependent rect. 18 1
12 73.16 humidity 60.0 10 < th dose dependent rect. 18 1
29 76.66 radiation 1.0 10 > th dose independent rect. 18 1
40 77.20 wind 3.0 10 > th dose dependent rect. 18 1
41 77.21 temperature 30.0 10 > th dose dependent rect. 18 1
56 77.30 humidity 60.0 10 < th dose independent rect. 18 1
73 77.89 atmosphere 1005.0 30 > th dose dependent rect. 2 1
74 77.90 temperature 20.0 30 > th dose dependent rect. 2 1
75 77.91 wind 3.0 30 < th dose dependent rect. 2 1
77 77.93 wind 1.0 30 < th dose independent rect. 2 1
80 77.94 temperature 20.0 30 > th dose independent rect. 2 1
81 77.94 atmosphere 1005.0 30 > th dose independent rect. 2 1
86 77.96 humidity 80.0 30 > th dose independent rect. 2 1
88 77.98 temperature 25.0 30 < th dose independent rect. 2 1
89 77.98 humidity 50.0 30 > th dose dependent rect. 2 1
93 77.99 temperature 10.0 30 > th dose independent rect. 2 1
96 77.99 humidity 50.0 30 > th dose independent rect. 2 1
99 77.99 atmosphere 995.0 30 > th dose independent rect. 2 1
101 77.99 atmosphere 1010.0 30 < th dose independent rect. 2 1
103 77.99 radiation 1.0 30 < th dose independent rect. 2 1
108 77.99 precipitation 0.1 30 < th dose independent rect. 2 1
109 77.99 temperature 10.0 30 > th dose independent rect. 3 23
112 77.99 radiation 1.0 30 < th dose dependent rect. 2 1
117 77.99 precipitation 0.1 30 < th dose dependent rect. 2 1
120 78.12 atmosphere 1015.0 30 < th dose dependent rect. 2 1
121 78.17 temperature 30.0 30 < th dose dependent rect. 2 1
125 78.34 precipitation 0.1 270 > th dose independent rect. 8 1
126 78.34 precipitation 0.1 270 > th dose dependent rect. 8 1
130 78.40 wind 9.0 30 < th dose independent rect. 3 23
131 78.44 wind 1.0 30 > th dose independent rect. 2 1
175 78.69 wind 5.0 10 > th dose independent rect. 18 1
194 78.95 humidity 80.0 10 > th dose independent rect. 12 1
197 79.07 humidity 90.0 10 < th dose dependent rect. 18 1
199 79.14 precipitation 0.1 720 < th dose independent rect. 3 8
200 79.14 precipitation 0.1 720 < th dose dependent rect. 3 8
208 79.32 wind 1.0 10 < th dose independent rect. 11 1
213 79.37 wind 7.0 10 < th dose independent rect. 19 23
215 79.38 humidity 80.0 10 < th dose independent rect. 18 1
216 79.40 temperature 25.0 10 > th dose independent rect. 18 1
218 79.41 atmosphere 1000.0 10 > th dose dependent rect. 18 1
223 79.44 atmosphere 1000.0 10 > th dose dependent rect. 15 4
232 79.45 atmosphere 1000.0 10 > th dose independent rect. 18 1
234 79.46 wind 7.0 10 < th dose independent rect. 18 1
236 79.46 temperature 10.0 10 > th dose independent rect. 18 1
239 79.46 humidity 50.0 10 > th dose independent rect. 18 1
241 79.46 atmosphere 1010.0 10 < th dose independent rect. 18 1
243 79.46 radiation 10.0 10 < th dose independent rect. 18 1
247 79.46 precipitation 0.1 10 < th dose independent rect. 18 1
248 79.46 temperature 10.0 10 > th dose independent rect. 19 23
249 79.46 precipitation 0.1 10 < th dose dependent rect. 18 1
253 79.48 humidity 50.0 30 > th dose independent rect. 2 17
255 79.51 precipitation 0.1 10 < th dose independent rect. 2 17
256 79.51 atmosphere 1000.0 90 > th dose dependent rect. 14 5
257 79.51 precipitation 0.1 10 < th dose dependent rect. 2 17
259 79.52 wind 1.0 1440 < th dose dependent rect. 17 1
262 79.54 temperature 10.0 30 > th dose dependent rect. 19 7
263 79.55 humidity 70.0 270 < th dose independent rect. 14 2
264 79.56 wind 1.0 1440 < th dose independent rect. 17 1
265 79.56 humidity 60.0 10 > th dose independent rect. 17 9
267 79.56 atmosphere 1015.0 10 < th dose dependent rect. 18 1
270 79.57 wind 9.0 10 < th dose independent rect. 19 7
271 79.57 temperature 10.0 10 > th dose independent rect. 19 7
272 79.57 temperature 30.0 10 < th dose independent rect. 19 7
273 79.57 humidity 50.0 10 > th dose independent rect. 19 7
275 79.57 atmosphere 995.0 10 > th dose independent rect. 19 7
276 79.57 radiation 1.0 10 < th dose independent rect. 19 7
281 79.57 temperature 10.0 10 > th dose independent rect. 2 17
283 79.57 atmosphere 1015.0 10 < th dose independent rect. 2 17
284 79.57 radiation 1.0 10 < th dose dependent rect. 19 7
300 79.58 precipitation 0.1 10 < th dose independent rect. 19 7
304 79.58 wind 1.0 1440 < th dose dependent rect. 16 3
305 79.58 radiation 1.0 270 > th dose dependent rect. 14 3
312 79.58 precipitation 0.1 10 < th dose dependent rect. 19 7
313 79.59 atmosphere 995.0 10 > th dose independent rect. 2 17
328 79.60 radiation 20.0 30 < th dose independent rect. 2 17
331 79.61 wind 9.0 10 < th dose independent rect. 2 17
335 79.63 atmosphere 1005.0 270 > th dose independent rect. 14 2
336 79.63 radiation 40.0 10 < th dose dependent rect. 18 1
339 79.65 atmosphere 1000.0 270 > th dose dependent rect. 14 2
350 79.65 radiation 20.0 270 < th dose dependent rect. 13 12
358 79.67 wind 5.0 270 > th dose independent rect. 12 5
361 79.68 radiation 20.0 270 > th dose independent rect. 14 2
363 79.68 radiation 20.0 270 < th dose dependent sin 15 NA
366 79.69 radiation 1.0 270 < th dose independent rect. 7 2
377 79.71 atmosphere 1005.0 10 < th dose dependent rect. 5 1
417 79.73 wind 3.0 10 > th dose dependent rect. 14 5
422 79.74 radiation 1.0 10 < th dose independent rect. 17 9
423 79.74 radiation 10.0 270 < th dose independent rect. 13 12
432 79.76 humidity 80.0 90 < th dose independent rect. 14 5
435 79.77 radiation 10.0 270 < th dose independent sin 15 NA
436 79.77 humidity 80.0 10 < th dose independent rect. 15 4
441 79.78 wind 3.0 10 > th dose independent rect. 14 5
442 79.78 wind 3.0 270 > th dose dependent rect. 12 5
445 79.79 wind 1.0 10 > th dose independent rect. 19 7
456 79.80 wind 9.0 4320 < th dose independent rect. 3 6
461 79.80 radiation 40.0 43200 < th dose dependent rect. 20 7
465 79.81 temperature 10.0 1440 > th dose independent rect. 20 7
468 79.81 temperature 30.0 1440 < th dose independent rect. 20 7
472 79.81 humidity 50.0 1440 > th dose independent rect. 20 7
478 79.81 atmosphere 995.0 1440 > th dose independent rect. 20 7
479 79.81 radiation 1.0 1440 < th dose independent rect. 20 7
499 79.81 temperature 30.0 10 < th dose independent rect. 17 9
500 79.81 temperature 10.0 1440 > th dose independent rect. 3 17
506 79.81 wind 9.0 10 < th dose dependent rect. 19 7
508 79.81 radiation 10.0 1440 < th dose dependent rect. 20 7
548 79.82 radiation 40.0 30 < th dose dependent rect. 2 17
552 79.83 wind 1.0 270 > th dose dependent rect. 14 2
582 79.85 radiation 10.0 270 > th dose independent sin 15 NA
611 79.86 atmosphere 995.0 30 > th dose dependent rect. 19 7
625 79.87 wind 1.0 10 > th dose independent rect. 19 9
628 79.88 precipitation 0.1 720 > th dose independent rect. 3 2
631 79.88 radiation 1.0 270 > th dose dependent sin 14 NA
637 79.89 wind 1.0 1440 < th dose independent rect. 16 4
638 79.89 precipitation 0.1 720 > th dose independent rect. 3 5
640 79.89 precipitation 0.1 720 > th dose independent rect. 3 8
648 79.89 precipitation 0.1 720 > th dose dependent rect. 3 8
658 79.90 precipitation 0.1 720 > th dose dependent rect. 3 2
660 79.90 precipitation 0.1 720 > th dose dependent rect. 3 5
663 79.90 humidity 50.0 10 > th dose dependent rect. 19 7
667 79.91 wind 7.0 10 > th dose independent rect. 15 2
724 79.92 wind 9.0 10 < th dose dependent rect. 18 1
732 79.92 radiation 1.0 10 < th dose dependent rect. 17 9
736 79.93 atmosphere 1015.0 10 < th dose independent rect. 19 7
755 79.94 atmosphere 995.0 10 > th dose independent rect. 19 23
809 79.96 precipitation 0.1 720 < th dose independent rect. 23 8
829 79.96 precipitation 0.1 720 < th dose dependent rect. 23 8
862 79.98 temperature 25.0 10 < th dose independent rect. 2 6
901 80.00 precipitation 0.1 720 < th dose independent rect. 23 16
911 80.00 precipitation 0.1 720 < th dose dependent rect. 23 16
921 80.01 radiation 20.0 270 < th dose dependent rect. 23 10
928 80.02 precipitation 0.1 720 < th dose independent rect. 3 2
935 80.02 radiation 1.0 720 < th dose dependent rect. 7 1
936 80.02 precipitation 0.1 720 < th dose dependent rect. 3 2
973 80.03 precipitation 0.1 10 < th dose independent rect. 19 23
975 80.03 humidity 90.0 270 < th dose dependent rect. 14 2
980 80.03 humidity 50.0 10 > th dose dependent rect. 17 9
986 80.03 precipitation 0.1 10 < th dose dependent rect. 19 23
1000 80.04 wind 9.0 10 > th dose dependent rect. 15 1