Os06g0674800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0674800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.66 | 0.317 | 8.67 | -0.95 | 0.147 | -0.71 | -1.01 | -0.68 | 0.0692 | 3.65 | 44.47 | 1168 | -- | -- |
| 46.2 | 0.317 | 8.67 | -0.902 | 0.138 | -0.713 | -1.03 | -- | 0.0773 | 3.44 | 44.5 | 1167 | -- | -- |
| 48.56 | 0.325 | 8.67 | -0.957 | 0.164 | -0.694 | -- | -0.786 | 0.0532 | 4.86 | 45.86 | 1169 | -- | -- |
| 49.33 | 0.327 | 8.67 | -0.881 | 0.154 | -0.735 | -- | -- | 0.0682 | 4.68 | 45.41 | 1169 | -- | -- |
| 49.78 | 0.329 | 8.67 | -0.938 | -- | -0.721 | -- | -0.777 | 0.0625 | -- | 45.6 | 1141 | -- | -- |
| 60.42 | 0.364 | 8.68 | -0.913 | 0.107 | -- | -1.1 | -- | 0.0254 | 3.88 | -- | -- | -- | -- |
| 62.48 | 0.37 | 8.67 | -0.897 | 0.195 | -- | -- | -- | 0.0312 | 7.48 | -- | -- | -- | -- |
| 50.5 | 0.331 | 8.66 | -0.876 | -- | -0.721 | -- | -- | 0.0868 | -- | 44.99 | 1167 | -- | -- |
| 68.31 | 0.385 | 8.64 | -- | 0.163 | -0.718 | -- | -- | 0.183 | 4.36 | 40 | 1214 | -- | -- |
| 64.51 | 0.375 | 8.68 | -0.894 | -- | -- | -- | -- | 0.0342 | -- | -- | -- | -- | -- |
| 83.69 | 0.428 | 8.65 | -- | 0.188 | -- | -- | -- | 0.131 | 7.8 | -- | -- | -- | -- |
| 69.25 | 0.388 | 8.63 | -- | -- | -0.714 | -- | -- | 0.221 | -- | 40 | 1169 | -- | -- |
| 85.6 | 0.432 | 8.65 | -- | -- | -- | -- | -- | 0.133 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.44 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 3 | 47.77 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 4 | 47.77 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 17 | 11 |
| 12 | 47.89 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 15 | 11 |
| 14 | 47.93 | humidity | 60.0 | 720 | > th | dose dependent | sin | 15 | NA |
| 17 | 47.95 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 19 | 47.96 | humidity | 80.0 | 720 | < th | dose dependent | sin | 12 | NA |
| 29 | 48.03 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 13 | 21 |
| 30 | 48.04 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 5 |
| 32 | 48.07 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 39 | 48.11 | humidity | 70.0 | 720 | > th | dose independent | rect. | 14 | 12 |
| 60 | 48.24 | humidity | 70.0 | 720 | > th | dose independent | sin | 15 | NA |
| 75 | 48.33 | humidity | 70.0 | 720 | < th | dose independent | sin | 13 | NA |
| 76 | 48.33 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 5 | 21 |
| 92 | 48.41 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 11 | 15 |
| 93 | 48.42 | radiation | 40.0 | 1440 | > th | dose dependent | sin | 12 | NA |
| 95 | 48.43 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 7 |
| 108 | 48.49 | wind | 3.0 | 43200 | > th | dose independent | rect. | 24 | 9 |
| 124 | 48.53 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 9 |
| 136 | 48.56 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 148 | 48.60 | wind | 3.0 | 43200 | < th | dose independent | rect. | 22 | 11 |
| 162 | 48.63 | wind | 3.0 | 43200 | > th | dose independent | rect. | 22 | 11 |
| 184 | 48.70 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 205 | 48.77 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 247 | 48.85 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 278 | 48.90 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 286 | 48.91 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 297 | 48.93 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 337 | 48.98 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 4 |
| 346 | 48.99 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 7 |
| 356 | 49.01 | humidity | 70.0 | 720 | < th | dose independent | rect. | 15 | 5 |
| 385 | 49.05 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 10 |
| 389 | 49.05 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 13 | 20 |
| 390 | 49.05 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 2 | 5 |
| 396 | 49.07 | humidity | 80.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 404 | 49.09 | humidity | 80.0 | 720 | > th | dose independent | rect. | 5 | 21 |
| 408 | 49.11 | humidity | 80.0 | 720 | > th | dose independent | rect. | 9 | 17 |
| 421 | 49.14 | humidity | 80.0 | 720 | > th | dose independent | rect. | 11 | 15 |
| 437 | 49.17 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 463 | 49.21 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 20 |
| 469 | 49.23 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 487 | 49.27 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 504 | 49.30 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 552 | 49.34 | humidity | 80.0 | 720 | > th | dose independent | rect. | 3 | 19 |
| 556 | 49.35 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 611 | 49.42 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 612 | 49.42 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 629 | 49.44 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 696 | 49.51 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 733 | 49.55 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 781 | 49.59 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 786 | 49.60 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 830 | 49.63 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 8 |
| 831 | 49.63 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 10 |
| 839 | 49.64 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 6 |
| 860 | 49.67 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 21 |
| 909 | 49.70 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 7 | 19 |
| 911 | 49.71 | wind | 7.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 918 | 49.71 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 935 | 49.73 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 936 | 49.73 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 943 | 49.73 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 958 | 49.75 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 967 | 49.75 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 8 | 3 |