Os06g0673700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0673700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 177.34 | 0.626 | 12 | 1.84 | 0.809 | -3.08 | 0.0222 | 2.34 | 0.501 | 0.754 | 19.67 | 3820 | -- | -- |
| 182.78 | 0.63 | 11.9 | 2.04 | 0.904 | -3.36 | 0.225 | -- | 0.619 | 0.631 | 19.3 | 5477 | -- | -- |
| 177.34 | 0.62 | 12 | 1.84 | 0.808 | -3.08 | -- | 2.33 | 0.501 | 0.749 | 19.67 | 3819 | -- | -- |
| 179.55 | 0.624 | 11.9 | 1.8 | 0.835 | -3.75 | -- | -- | 0.524 | 0.791 | 19.37 | 5219 | -- | -- |
| 217.95 | 0.688 | 12 | 1.79 | -- | -3.18 | -- | 2.26 | 0.476 | -- | 19.75 | 3815 | -- | -- |
| 387.3 | 0.923 | 11.7 | 4.15 | 0.949 | -- | -0.186 | -- | 1.43 | 0.782 | -- | -- | -- | -- |
| 387.44 | 0.922 | 11.7 | 4.16 | 0.95 | -- | -- | -- | 1.43 | 0.802 | -- | -- | -- | -- |
| 222.94 | 0.695 | 11.9 | 1.8 | -- | -3.82 | -- | -- | 0.488 | -- | 19.5 | 5238 | -- | -- |
| 165.45 | 0.599 | 12 | -- | 0.876 | -4.42 | -- | -- | 0.166 | 0.0918 | 17.9 | 24171 | -- | -- |
| 443.83 | 0.984 | 11.7 | 4.19 | -- | -- | -- | -- | 1.45 | -- | -- | -- | -- | -- |
| 842.74 | 1.36 | 11.8 | -- | 1.02 | -- | -- | -- | 0.97 | 0.987 | -- | -- | -- | -- |
| 211.74 | 0.678 | 12 | -- | -- | -4.51 | -- | -- | 0.0929 | -- | 17.9 | 24085 | -- | -- |
| 907.13 | 1.41 | 11.8 | -- | -- | -- | -- | -- | 0.986 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 155.37 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 7 | 155.74 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 16 | 6 |
| 27 | 156.18 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 7 |
| 58 | 156.74 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 60 | 156.77 | humidity | 70 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 61 | 156.77 | atmosphere | 1010 | 43200 | > th | dose dependent | sin | 16 | NA |
| 82 | 156.97 | humidity | 70 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 98 | 157.05 | humidity | 70 | 43200 | > th | dose independent | rect. | 16 | 7 |
| 129 | 157.25 | humidity | 70 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 157 | 157.41 | humidity | 70 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 188 | 157.58 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 260 | 157.80 | atmosphere | 1010 | 43200 | > th | dose dependent | no | NA | NA |
| 276 | 157.87 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 18 | 23 |
| 286 | 157.91 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 23 | 23 |
| 317 | 158.07 | humidity | 80 | 43200 | < th | dose dependent | rect. | 16 | 6 |
| 322 | 158.09 | humidity | 80 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 360 | 158.35 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 388 | 158.52 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 401 | 158.66 | humidity | 80 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 414 | 158.74 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 13 | 5 |
| 469 | 159.07 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 526 | 159.39 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 544 | 159.46 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 550 | 159.47 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 558 | 159.51 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 572 | 159.58 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 595 | 159.70 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 610 | 159.76 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 706 | 160.77 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 15 |
| 728 | 161.09 | humidity | 70 | 43200 | < th | dose independent | sin | 16 | NA |
| 752 | 161.33 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 3 | 18 |
| 772 | 161.45 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 12 | 21 |
| 775 | 161.47 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 802 | 161.67 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 811 | 161.73 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 12 | 20 |
| 829 | 161.82 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 3 | 19 |
| 855 | 161.96 | atmosphere | 1015 | 43200 | < th | dose independent | sin | 21 | NA |
| 885 | 162.05 | atmosphere | 1015 | 43200 | > th | dose independent | sin | 19 | NA |
| 889 | 162.06 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 956 | 162.24 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 5 | 1 |