Os06g0673300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0673300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.36 | 0.25 | 9.14 | -0.364 | 0.796 | 0.367 | -0.117 | -0.921 | 0.101 | 17.4 | 21.4 | 4254 | -- | -- |
| 29.58 | 0.253 | 9.1 | -0.139 | 0.788 | 0.477 | -0.126 | -- | 0.15 | 17.2 | 21.4 | 3918 | -- | -- |
| 28.39 | 0.248 | 9.14 | -0.366 | 0.793 | 0.366 | -- | -0.928 | 0.101 | 17.4 | 21.41 | 4469 | -- | -- |
| 29.18 | 0.252 | 9.1 | -0.271 | 0.769 | 0.636 | -- | -- | 0.158 | 17.4 | 18.99 | 6292 | -- | -- |
| 60.5 | 0.364 | 9.08 | -0.0535 | -- | 0.313 | -- | -0.312 | 0.197 | -- | 21.42 | 4736 | -- | -- |
| 34.85 | 0.277 | 9.06 | 0.143 | 0.785 | -- | -0.0515 | -- | 0.313 | 17.5 | -- | -- | -- | -- |
| 34.86 | 0.276 | 9.06 | 0.143 | 0.785 | -- | -- | -- | 0.312 | 17.5 | -- | -- | -- | -- |
| 61.08 | 0.366 | 9.07 | 0.021 | -- | 0.32 | -- | -- | 0.215 | -- | 21.42 | 4736 | -- | -- |
| 30.22 | 0.256 | 9.09 | -- | 0.791 | 0.494 | -- | -- | 0.208 | 17.5 | 18.97 | 5837 | -- | -- |
| 66.91 | 0.382 | 9.05 | 0.117 | -- | -- | -- | -- | 0.293 | -- | -- | -- | -- | -- |
| 35.4 | 0.278 | 9.07 | -- | 0.782 | -- | -- | -- | 0.297 | 17.5 | -- | -- | -- | -- |
| 61.09 | 0.365 | 9.07 | -- | -- | 0.323 | -- | -- | 0.212 | -- | 21.42 | 4736 | -- | -- |
| 67.27 | 0.383 | 9.05 | -- | -- | -- | -- | -- | 0.28 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.95 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 21 |
| 4 | 27.21 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 22 |
| 11 | 27.61 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 18 |
| 12 | 27.63 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 25 | 27.81 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 27 | 27.82 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 3 |
| 98 | 28.14 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 110 | 28.17 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 111 | 28.17 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 143 | 28.24 | temperature | 20 | 90 | > th | dose independent | rect. | 8 | 21 |
| 144 | 28.24 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 151 | 28.26 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 165 | 28.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 166 | 28.28 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 208 | 28.34 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 213 | 28.35 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 218 | 28.35 | wind | 3 | 43200 | < th | dose dependent | rect. | 18 | 6 |
| 232 | 28.37 | humidity | 70 | 43200 | > th | dose independent | rect. | 22 | 12 |
| 234 | 28.37 | temperature | 15 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 259 | 28.40 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 13 |
| 279 | 28.41 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 286 | 28.42 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 3 |
| 311 | 28.44 | humidity | 70 | 43200 | > th | dose independent | rect. | 20 | 15 |
| 314 | 28.44 | temperature | 25 | 4320 | < th | dose dependent | sin | 14 | NA |
| 333 | 28.45 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 334 | 28.46 | wind | 3 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 355 | 28.47 | wind | 3 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 363 | 28.47 | humidity | 70 | 43200 | < th | dose dependent | sin | 7 | NA |
| 369 | 28.47 | humidity | 80 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 391 | 28.49 | humidity | 70 | 43200 | < th | dose independent | sin | 8 | NA |
| 419 | 28.50 | humidity | 90 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 471 | 28.52 | humidity | 90 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 486 | 28.53 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 525 | 28.53 | humidity | 70 | 43200 | < th | dose dependent | rect. | 20 | 18 |
| 554 | 28.55 | humidity | 70 | 43200 | > th | dose independent | sin | 8 | NA |
| 626 | 28.57 | temperature | 20 | 10 | > th | dose independent | rect. | 8 | 22 |
| 643 | 28.57 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 15 |
| 714 | 28.59 | temperature | 25 | 4320 | < th | dose dependent | rect. | 9 | 17 |
| 779 | 28.61 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 864 | 28.63 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 875 | 28.63 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 899 | 28.63 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |