Os06g0672700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0672700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.25 | 0.426 | 8.9 | 1.07 | 1.28 | -1.16 | 0.867 | 0.911 | 0.421 | 16.1 | 30.3 | 6 | -- | -- |
| 83.11 | 0.425 | 8.89 | 1.19 | 1.27 | -1.17 | 0.619 | -- | 0.446 | 16.1 | 29.8 | 5 | -- | -- |
| 83.88 | 0.427 | 8.89 | 1.17 | 1.29 | -1.15 | -- | 0.374 | 0.451 | 16 | 30.37 | 5 | -- | -- |
| 84.01 | 0.427 | 8.88 | 1.22 | 1.27 | -1.17 | -- | -- | 0.463 | 16 | 30.21 | 5 | -- | -- |
| 148.01 | 0.567 | 8.91 | 0.882 | -- | -2.67 | -- | 0.293 | 0.278 | -- | 66.32 | 53 | -- | -- |
| 101.17 | 0.472 | 8.83 | 1.49 | 1.62 | -- | 0.606 | -- | 0.681 | 15.7 | -- | -- | -- | -- |
| 102.25 | 0.474 | 8.83 | 1.5 | 1.63 | -- | -- | -- | 0.684 | 15.6 | -- | -- | -- | -- |
| 148.08 | 0.567 | 8.91 | 0.93 | -- | -2.69 | -- | -- | 0.281 | -- | 75.41 | 26 | -- | -- |
| 119.55 | 0.509 | 8.92 | -- | 1.08 | -1.66 | -- | -- | 0.234 | 16.3 | 29.99 | 7 | -- | -- |
| 249.32 | 0.738 | 8.83 | 1.43 | -- | -- | -- | -- | 0.641 | -- | -- | -- | -- | -- |
| 161.34 | 0.594 | 8.87 | -- | 1.6 | -- | -- | -- | 0.518 | 15.6 | -- | -- | -- | -- |
| 167.27 | 0.602 | 8.95 | -- | -- | -2.58 | -- | -- | 0.0943 | -- | 30.57 | 57 | -- | -- |
| 303.21 | 0.813 | 8.86 | -- | -- | -- | -- | -- | 0.483 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.78 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 21 |
| 2 | 71.23 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 6 | 72.00 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 11 | 72.16 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 30 | 72.94 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 14 |
| 37 | 73.22 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 15 |
| 63 | 74.58 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 123 | 76.01 | temperature | 10.0 | 30 | > th | dose dependent | sin | 5 | NA |
| 127 | 76.07 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 148 | 76.47 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 151 | 76.49 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 21 |
| 181 | 76.97 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 189 | 77.06 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 199 | 77.29 | radiation | 1.0 | 270 | > th | dose independent | sin | 3 | NA |
| 215 | 77.51 | temperature | 30.0 | 30 | < th | dose dependent | sin | 5 | NA |
| 219 | 77.58 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 13 |
| 227 | 77.73 | radiation | 1.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 237 | 77.84 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 248 | 78.06 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 15 |
| 251 | 78.12 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 22 |
| 253 | 78.13 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 9 |
| 269 | 78.25 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 23 | 13 |
| 282 | 78.39 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 329 | 78.80 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 350 | 79.00 | temperature | 20.0 | 90 | > th | dose independent | rect. | 23 | 13 |
| 373 | 79.23 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 383 | 79.30 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 399 | 79.41 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 403 | 79.42 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 453 | 79.79 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 469 | 79.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 3 |
| 472 | 79.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 522 | 80.21 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 530 | 80.25 | radiation | 1.0 | 270 | < th | dose independent | sin | 4 | NA |
| 534 | 80.26 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 535 | 80.26 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 571 | 80.40 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 6 |
| 606 | 80.52 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 613 | 80.56 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 629 | 80.61 | temperature | 20.0 | 90 | > th | dose independent | sin | 4 | NA |
| 656 | 80.72 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 659 | 80.72 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 662 | 80.72 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 663 | 80.72 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 665 | 80.72 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 675 | 80.73 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 687 | 80.77 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 716 | 80.87 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 741 | 80.95 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 748 | 81.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 751 | 81.00 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 754 | 81.00 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 756 | 81.00 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 799 | 81.13 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 13 |
| 815 | 81.20 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 5 |
| 835 | 81.28 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 10 |
| 881 | 81.39 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 14 |
| 892 | 81.43 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 893 | 81.43 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 949 | 81.67 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 21 |
| 953 | 81.67 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 960 | 81.71 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 985 | 81.81 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 6 |