Os06g0671600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0671600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 688.87 | 1.23 | 7.52 | 4.92 | 2.89 | 0.988 | 3.5 | 14.1 | 1.57 | 9.18 | 5.029 | 1340 | 20 | -- |
| 834.97 | 1.35 | 7.25 | 5.03 | 3.22 | 1.03 | 2.98 | -- | 1.59 | 9.01 | 1.8 | 11152 | 20.7 | -- |
| 727.64 | 1.26 | 7.49 | 4.97 | 2.9 | 1.19 | -- | 14.6 | 1.6 | 9.16 | 5.456 | 1419 | 20.3 | -- |
| 836.08 | 1.35 | 7.25 | 5.42 | 3.15 | 2.12 | -- | -- | 1.65 | 9.19 | 1.8 | 11105 | 17 | -- |
| 1204.14 | 1.62 | 7.56 | 4.83 | -- | 0.405 | -- | 13.5 | 1.57 | -- | 5.4 | 1366 | 19.8 | -- |
| 853.05 | 1.37 | 7.18 | 4.59 | 2.94 | -- | 2.56 | -- | 1.87 | 9.13 | -- | -- | -- | -- |
| 876.11 | 1.39 | 7.18 | 4.68 | 2.93 | -- | -- | -- | 1.88 | 9.12 | -- | -- | -- | -- |
| 1285.8 | 1.67 | 7.25 | 4.62 | -- | 2.57 | -- | -- | 1.68 | -- | 0.8 | 47520 | 15.3 | -- |
| 926.76 | 1.42 | 7.42 | -- | 3.72 | -4.02 | -- | -- | 0.217 | 8.99 | 5.8 | 47520 | 0.386 | -- |
| 1370.82 | 1.73 | 7.26 | 4.67 | -- | -- | -- | -- | 1.89 | -- | -- | -- | -- | -- |
| 1453.24 | 1.78 | 7.3 | -- | 2.93 | -- | -- | -- | 1.36 | 9 | -- | -- | -- | -- |
| 1398.49 | 1.74 | 7.59 | -- | -- | -3.99 | -- | -- | 0.43 | -- | 5.926 | 47520 | 0.0613 | -- |
| 1946.52 | 2.06 | 7.38 | -- | -- | -- | -- | -- | 1.37 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 645.13 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 2 | 645.16 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 6 | 645.41 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 20 | 646.28 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 22 | 14 |
| 64 | 646.67 | atmosphere | 1005 | 14400 | > th | dose dependent | sin | 7 | NA |
| 168 | 647.52 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 232 | 648.06 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 256 | 648.24 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 257 | 648.25 | atmosphere | 1005 | 14400 | > th | dose dependent | no | NA | NA |
| 266 | 648.30 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 271 | 648.33 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 7 | 23 |
| 506 | 652.09 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 542 | 653.50 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 561 | 653.97 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 6 | 1 |