Os06g0671300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os06g0671300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 753.38 | 1.29 | 6.24 | 5.26 | 0.918 | 0.969 | -0.214 | 13.2 | 2.06 | 14.3 | 5.024 | 1466 | 21.8 | -- |
| 845.08 | 1.36 | 5.99 | 5.04 | 0.989 | -0.243 | -0.505 | -- | 2.29 | 13.8 | 2.299 | 933 | 22.6 | -- |
| 753.46 | 1.28 | 6.25 | 5.27 | 0.921 | 0.954 | -- | 13 | 2.05 | 14.2 | 5 | 1464 | 21.6 | -- |
| 794.93 | 1.31 | 6.07 | 4.97 | 0.726 | -1.46 | -- | -- | 2.13 | 14 | 10.4 | 2778 | 23.1 | -- |
| 800.53 | 1.32 | 6.24 | 5.16 | -- | 0.708 | -- | 12.8 | 2.01 | -- | 4.781 | 1464 | 21.6 | -- |
| 846.65 | 1.36 | 5.99 | 5.08 | 0.926 | -- | -0.541 | -- | 2.29 | 14.1 | -- | -- | -- | -- |
| 847.76 | 1.36 | 5.99 | 5.07 | 0.926 | -- | -- | -- | 2.29 | 14.1 | -- | -- | -- | -- |
| 841.48 | 1.35 | 6.03 | 4.98 | -- | -1.6 | -- | -- | 2.19 | -- | 10.39 | 2770 | 22.7 | -- |
| 962.13 | 1.44 | 6.32 | -- | 0.92 | -4.25 | -- | -- | 0.754 | 12.6 | 6 | 47520 | 23.9 | -- |
| 898.98 | 1.4 | 6 | 5.03 | -- | -- | -- | -- | 2.27 | -- | -- | -- | -- | -- |
| 1524.37 | 1.83 | 6.12 | -- | 0.83 | -- | -- | -- | 1.73 | 14 | -- | -- | -- | -- |
| 1004.81 | 1.48 | 6.34 | -- | -- | -4.14 | -- | -- | 0.776 | -- | 5.963 | 45916 | 0.443 | -- |
| 1565.85 | 1.85 | 6.13 | -- | -- | -- | -- | -- | 1.71 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 744.29 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 2 | 745.14 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 3 | 745.50 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 4 | 745.50 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 5 | 745.52 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 10 | 747.67 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 11 | 749.10 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 26 | 749.63 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 47 | 752.32 | wind | 3.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 50 | 752.66 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 5 | 13 |
| 51 | 752.68 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 7 | 11 |
| 53 | 752.71 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 56 | 752.82 | wind | 5.0 | 1440 | > th | dose independent | rect. | 1 | 17 |
| 58 | 752.85 | wind | 5.0 | 1440 | < th | dose independent | rect. | 1 | 17 |
| 59 | 752.86 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 9 | 9 |
| 65 | 753.17 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 68 | 753.46 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 69 | 753.50 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 78 | 753.59 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 79 | 753.59 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 92 | 753.72 | wind | 5.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 96 | 753.76 | wind | 5.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 97 | 753.77 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 24 | 4 |
| 101 | 753.82 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 102 | 753.82 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 114 | 753.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 117 | 753.95 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 120 | 754.00 | wind | 3.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 127 | 754.08 | wind | 7.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 138 | 754.22 | wind | 5.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 141 | 754.25 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 175 | 754.65 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 13 | 16 |
| 180 | 754.67 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 193 | 754.78 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 200 | 754.82 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 5 | 13 |
| 216 | 754.90 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 230 | 754.96 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 239 | 754.99 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 24 | 18 |
| 260 | 755.07 | wind | 5.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 265 | 755.09 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 273 | 755.11 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 274 | 755.11 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 281 | 755.14 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 333 | 755.26 | atmosphere | 1000.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 400 | 755.40 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 408 | 755.42 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 19 | 11 |
| 425 | 755.45 | atmosphere | 1000.0 | 14400 | > th | dose dependent | no | NA | NA |
| 458 | 755.52 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 478 | 755.56 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 496 | 755.60 | wind | 7.0 | 1440 | < th | dose dependent | sin | 4 | NA |
| 528 | 755.67 | wind | 5.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 549 | 755.72 | wind | 7.0 | 1440 | < th | dose dependent | rect. | 3 | 11 |
| 642 | 755.94 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 684 | 756.08 | wind | 1.0 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 717 | 756.19 | wind | 5.0 | 1440 | > th | dose independent | rect. | 3 | 7 |
| 721 | 756.21 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 734 | 756.25 | wind | 5.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 764 | 756.37 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 789 | 756.52 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 824 | 756.76 | wind | 7.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 856 | 756.93 | wind | 7.0 | 1440 | < th | dose dependent | rect. | 1 | 17 |
| 867 | 756.99 | wind | 1.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 938 | 757.42 | wind | 5.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 948 | 757.49 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 0 | NA |
| 950 | 757.49 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 951 | 757.50 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 1 | 17 |
| 985 | 757.65 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |