Os06g0671000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Potassium transporter 1 (AtPOT1) (AtKUP1) (AtKT1).
FiT-DB / Search/ Help/ Sample detail
|
Os06g0671000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Potassium transporter 1 (AtPOT1) (AtKUP1) (AtKT1).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 198.22 | 0.661 | 8.19 | 1.97 | 2.7 | 0.573 | 0.746 | 5.31 | 0.806 | 14.8 | 0.9287 | 14198 | -- | -- |
| 220.28 | 0.691 | 8.34 | 1.2 | 2.7 | 0.975 | 0.775 | -- | 0.587 | 14.8 | 44.34 | 33569 | -- | -- |
| 199.12 | 0.657 | 8.18 | 2.04 | 2.69 | 0.63 | -- | 5.38 | 0.817 | 14.9 | 0.8517 | 14494 | -- | -- |
| 219.88 | 0.691 | 8.33 | 1.2 | 2.68 | 0.94 | -- | -- | 0.605 | 14.8 | 44.52 | 32889 | -- | -- |
| 458.86 | 1 | 8.36 | 0.603 | -- | 1.27 | -- | -0.0647 | 0.469 | -- | 1.08 | 13480 | -- | -- |
| 231.88 | 0.714 | 8.35 | 0.719 | 2.65 | -- | 0.428 | -- | 0.564 | 14.9 | -- | -- | -- | -- |
| 232.5 | 0.714 | 8.35 | 0.728 | 2.65 | -- | -- | -- | 0.566 | 14.9 | -- | -- | -- | -- |
| 458.89 | 1 | 8.36 | 0.604 | -- | 1.27 | -- | -- | 0.47 | -- | 1.08 | 13480 | -- | -- |
| 240.55 | 0.722 | 8.38 | -- | 2.7 | 0.476 | -- | -- | 0.586 | 14.9 | 40.3 | 32957 | -- | -- |
| 637.64 | 1.18 | 8.36 | 0.615 | -- | -- | -- | -- | 0.498 | -- | -- | -- | -- | -- |
| 246.49 | 0.734 | 8.36 | -- | 2.64 | -- | -- | -- | 0.485 | 14.9 | -- | -- | -- | -- |
| 468.49 | 1.01 | 8.38 | -- | -- | 1.27 | -- | -- | 0.403 | -- | 1.08 | 13480 | -- | -- |
| 647.63 | 1.19 | 8.37 | -- | -- | -- | -- | -- | 0.43 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 194.49 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 21 | 195.11 | wind | 3 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 32 | 195.33 | wind | 3 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 68 | 195.92 | wind | 1 | 43200 | < th | dose independent | rect. | 7 | 17 |
| 70 | 195.94 | wind | 1 | 43200 | < th | dose independent | rect. | 12 | 11 |
| 71 | 195.94 | wind | 5 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 79 | 196.01 | wind | 1 | 43200 | < th | dose independent | sin | 20 | NA |
| 109 | 196.20 | wind | 1 | 43200 | > th | dose independent | sin | 20 | NA |
| 121 | 196.24 | atmosphere | 1005 | 14400 | > th | dose dependent | sin | 17 | NA |
| 123 | 196.25 | wind | 1 | 43200 | > th | dose independent | rect. | 7 | 17 |
| 130 | 196.29 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 10 |
| 136 | 196.31 | wind | 1 | 43200 | > th | dose independent | rect. | 12 | 10 |
| 146 | 196.34 | wind | 1 | 43200 | > th | dose independent | rect. | 11 | 12 |
| 170 | 196.42 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 9 |
| 201 | 196.50 | wind | 1 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 252 | 196.60 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 277 | 196.64 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 14 |
| 345 | 196.77 | temperature | 20 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 496 | 197.05 | wind | 1 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 513 | 197.08 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 11 |
| 529 | 197.11 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 556 | 197.14 | radiation | 1 | 43200 | < th | dose dependent | rect. | 20 | 21 |
| 566 | 197.15 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 19 |
| 572 | 197.16 | wind | 1 | 43200 | < th | dose dependent | rect. | 7 | 17 |
| 581 | 197.17 | radiation | 1 | 43200 | < th | dose dependent | sin | 2 | NA |
| 589 | 197.18 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 597 | 197.18 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 23 |
| 615 | 197.21 | wind | 1 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 617 | 197.21 | humidity | 50 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 619 | 197.21 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 13 |
| 626 | 197.21 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 20 |
| 630 | 197.22 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 671 | 197.25 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 703 | 197.27 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 15 |
| 712 | 197.28 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 715 | 197.28 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 13 |
| 751 | 197.31 | humidity | 50 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 789 | 197.34 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 798 | 197.35 | atmosphere | 1005 | 43200 | > th | dose dependent | no | NA | NA |
| 810 | 197.36 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 19 | 1 |