Os06g0668000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0668000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.69 | 0.523 | 3.25 | -0.00687 | 0.313 | 0.567 | 0.0692 | 0.39 | 0.223 | 1.31 | 39.37 | 5055 | -- | -- |
| 123.94 | 0.519 | 3.26 | 0.0116 | 0.304 | 0.559 | 0.0736 | -- | 0.223 | 1.37 | 39.4 | 5055 | -- | -- |
| 123.71 | 0.518 | 3.25 | -0.00922 | 0.312 | 0.566 | -- | 0.392 | 0.223 | 1.35 | 39.36 | 5055 | -- | -- |
| 123.96 | 0.519 | 3.26 | 0.0101 | 0.306 | 0.56 | -- | -- | 0.224 | 1.33 | 39.35 | 5056 | -- | -- |
| 128.88 | 0.529 | 3.25 | -0.00323 | -- | 0.645 | -- | 0.357 | 0.224 | -- | 40 | 4839 | -- | -- |
| 130.67 | 0.536 | 3.27 | 0.127 | 0.332 | -- | -0.00866 | -- | 0.156 | 2.19 | -- | -- | -- | -- |
| 130.67 | 0.535 | 3.27 | 0.127 | 0.332 | -- | -- | -- | 0.156 | 2.18 | -- | -- | -- | -- |
| 128.89 | 0.529 | 3.25 | 0.121 | -- | 0.473 | -- | -- | 0.244 | -- | 40.15 | 4834 | -- | -- |
| 123.96 | 0.519 | 3.26 | -- | 0.309 | 0.562 | -- | -- | 0.221 | 1.32 | 39.36 | 5055 | -- | -- |
| 137.26 | 0.547 | 3.27 | 0.141 | -- | -- | -- | -- | 0.164 | -- | -- | -- | -- | -- |
| 131.1 | 0.536 | 3.28 | -- | 0.335 | -- | -- | -- | 0.142 | 2.19 | -- | -- | -- | -- |
| 128.71 | 0.528 | 3.26 | -- | -- | 0.548 | -- | -- | 0.246 | -- | 42.33 | 4824 | -- | -- |
| 137.79 | 0.548 | 3.27 | -- | -- | -- | -- | -- | 0.149 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 122.77 | wind | 1.0 | 30 | < th | dose dependent | rect. | 5 | 1 |
| 3 | 123.01 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 4 | 123.13 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 5 | 123.18 | wind | 1.0 | 30 | < th | dose dependent | rect. | 4 | 5 |
| 6 | 123.19 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 10 | 123.30 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 13 | 123.33 | wind | 1.0 | 30 | < th | dose independent | rect. | 5 | 1 |
| 14 | 123.34 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 15 | 123.39 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 18 | 123.40 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 23 | 123.43 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 25 | 123.43 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 26 | 123.43 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 29 | 123.43 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 30 | 123.43 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 32 | 123.43 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 37 | 123.43 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 38 | 123.43 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 39 | 123.43 | wind | 9.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 40 | 123.43 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 45 | 123.43 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 52 | 123.53 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 56 | 123.56 | radiation | 40.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 85 | 123.73 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 107 | 123.82 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 113 | 123.84 | radiation | 40.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 187 | 123.91 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 194 | 123.91 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 3 | 9 |
| 257 | 123.93 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 284 | 123.95 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 285 | 123.95 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 3 |
| 307 | 123.97 | radiation | 40.0 | 14400 | > th | dose independent | no | NA | NA |
| 470 | 123.98 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 15 | 21 |
| 483 | 124.02 | radiation | 40.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 485 | 124.02 | radiation | 40.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 641 | 124.08 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 643 | 124.08 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 4 |
| 646 | 124.09 | radiation | 40.0 | 14400 | < th | dose independent | no | NA | NA |
| 798 | 124.10 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 15 | 18 |
| 804 | 124.11 | radiation | 30.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 866 | 124.13 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 3 |