Os06g0666800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0666800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 322.67 | 0.844 | 3.73 | -1.71 | 0.584 | 1.49 | 0.482 | -4.38 | -0.0285 | 4.91 | 25.28 | 1283 | -- | -- |
| 328.98 | 0.845 | 3.59 | -0.572 | 0.587 | 1.04 | 0.285 | -- | 0.26 | 4.83 | 25.37 | 1274 | -- | -- |
| 323.22 | 0.837 | 3.73 | -1.7 | 0.59 | 1.49 | -- | -4.37 | -0.0125 | 4.9 | 25.46 | 1282 | -- | -- |
| 329.25 | 0.845 | 3.59 | -0.579 | 0.583 | 1.05 | -- | -- | 0.257 | 4.83 | 25.4 | 1274 | -- | -- |
| 340.64 | 0.86 | 3.74 | -1.69 | -- | 1.6 | -- | -4.15 | -0.0624 | -- | 24.7 | 1259 | -- | -- |
| 370.44 | 0.902 | 3.57 | -0.238 | 0.708 | -- | 0.507 | -- | 0.36 | 4.17 | -- | -- | -- | -- |
| 371.16 | 0.902 | 3.57 | -0.244 | 0.711 | -- | -- | -- | 0.357 | 4.14 | -- | -- | -- | -- |
| 346.42 | 0.867 | 3.61 | -0.599 | -- | 1.19 | -- | -- | 0.22 | -- | 24.7 | 1256 | -- | -- |
| 337.39 | 0.855 | 3.57 | -- | 0.592 | 0.909 | -- | -- | 0.36 | 4.82 | 26 | 1256 | -- | -- |
| 398.56 | 0.933 | 3.57 | -0.215 | -- | -- | -- | -- | 0.376 | -- | -- | -- | -- | -- |
| 372.72 | 0.903 | 3.56 | -- | 0.706 | -- | -- | -- | 0.384 | 4.15 | -- | -- | -- | -- |
| 355.2 | 0.878 | 3.59 | -- | -- | 1.05 | -- | -- | 0.307 | -- | 24.87 | 1248 | -- | -- |
| 399.78 | 0.933 | 3.57 | -- | -- | -- | -- | -- | 0.4 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 312.34 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 2 | 312.78 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 20 | 317.84 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 30 | 319.09 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 20 | 14 |
| 36 | 319.49 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 42 | 319.77 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 71 | 320.66 | temperature | 25.0 | 720 | > th | dose dependent | sin | 11 | NA |
| 100 | 321.51 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 9 | NA |
| 103 | 321.62 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 130 | 322.48 | temperature | 25.0 | 720 | > th | dose independent | rect. | 17 | 7 |
| 204 | 324.77 | wind | 1.0 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 217 | 325.03 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 8 |
| 238 | 325.14 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 277 | 325.86 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 12 |
| 283 | 326.01 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 300 | 326.22 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 4 | 2 |
| 309 | 326.40 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 6 | 18 |
| 322 | 326.51 | temperature | 25.0 | 720 | < th | dose independent | rect. | 17 | 7 |
| 352 | 326.69 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 371 | 326.82 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 388 | 327.01 | humidity | 70.0 | 720 | < th | dose independent | rect. | 18 | 13 |
| 396 | 327.05 | humidity | 70.0 | 720 | < th | dose independent | rect. | 18 | 2 |
| 469 | 327.36 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 532 | 328.01 | humidity | 90.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 556 | 328.11 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 18 | 13 |
| 558 | 328.13 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 18 | 2 |
| 586 | 328.34 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 602 | 328.50 | temperature | 25.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 614 | 328.63 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 626 | 328.82 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 636 | 329.00 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 637 | 329.00 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 673 | 329.22 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 739 | 329.80 | radiation | 30.0 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 742 | 329.84 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 779 | 330.06 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 799 | 330.26 | wind | 1.0 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 803 | 330.28 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 816 | 330.47 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 832 | 330.59 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 19 |
| 836 | 330.66 | temperature | 15.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 843 | 330.75 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 24 | 8 |
| 848 | 330.77 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 871 | 330.85 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 886 | 330.85 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 889 | 330.87 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 903 | 330.95 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 906 | 330.95 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 910 | 330.95 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 912 | 330.95 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 920 | 330.95 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 12 |
| 923 | 330.96 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 924 | 330.97 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 932 | 331.00 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 17 | 8 |
| 950 | 331.16 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 15 |
| 953 | 331.16 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 958 | 331.20 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 10 |
| 964 | 331.22 | temperature | 30.0 | 1440 | > th | dose independent | sin | 13 | NA |
| 992 | 331.31 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 4 |