Os06g0665800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein.
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Os06g0665800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.53 | 0.247 | 11.1 | 1.19 | 0.369 | 0.473 | 0.401 | -0.26 | 0.483 | 0.323 | 17.77 | 1296 | -- | -- |
| 27.5 | 0.244 | 11.1 | 1.19 | 0.382 | 0.469 | 0.396 | -- | 0.476 | 0.159 | 17.23 | 1240 | -- | -- |
| 27.88 | 0.246 | 11.1 | 1.2 | 0.376 | 0.495 | -- | -0.414 | 0.486 | 23.9 | 17.8 | 1240 | -- | -- |
| 28.19 | 0.247 | 11.1 | 1.17 | 0.415 | 0.476 | -- | -- | 0.476 | 23.7 | 18.1 | 1168 | -- | -- |
| 32.36 | 0.265 | 11.1 | 1.05 | -- | 0.438 | -- | 0.156 | 0.436 | -- | 17.88 | 1678 | -- | -- |
| 35.31 | 0.279 | 11.1 | 1.1 | 0.264 | -- | 0.383 | -- | 0.362 | 0.669 | -- | -- | -- | -- |
| 35.94 | 0.281 | 11.1 | 1.08 | 0.263 | -- | -- | -- | 0.36 | 0.592 | -- | -- | -- | -- |
| 32.16 | 0.264 | 11.1 | 1.1 | -- | 0.465 | -- | -- | 0.451 | -- | 17.8 | 1685 | -- | -- |
| 56.91 | 0.351 | 11.1 | -- | 0.358 | 0.445 | -- | -- | 0.441 | 0.73 | 19.99 | 8618 | -- | -- |
| 40.26 | 0.296 | 11.1 | 1.09 | -- | -- | -- | -- | 0.364 | -- | -- | -- | -- | -- |
| 66.9 | 0.383 | 11.2 | -- | 0.279 | -- | -- | -- | 0.239 | 0.781 | -- | -- | -- | -- |
| 56.05 | 0.349 | 11.1 | -- | -- | 0.717 | -- | -- | 0.439 | -- | 20 | 26372 | -- | -- |
| 71.78 | 0.395 | 11.2 | -- | -- | -- | -- | -- | 0.243 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.96 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 5 | 27.96 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 6 | 27.97 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 32 | 28.06 | radiation | 20 | 1440 | < th | dose independent | sin | 18 | NA |
| 36 | 28.09 | radiation | 20 | 1440 | < th | dose dependent | rect. | 9 | 22 |
| 61 | 28.23 | radiation | 20 | 1440 | < th | dose dependent | rect. | 9 | 14 |
| 69 | 28.24 | radiation | 20 | 1440 | < th | dose dependent | rect. | 9 | 9 |
| 120 | 28.28 | radiation | 20 | 1440 | < th | dose dependent | sin | 22 | NA |
| 129 | 28.33 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 138 | 28.35 | radiation | 20 | 1440 | > th | dose independent | rect. | 9 | 8 |
| 162 | 28.36 | radiation | 20 | 1440 | < th | dose independent | rect. | 6 | 17 |
| 185 | 28.37 | radiation | 20 | 1440 | < th | dose independent | no | NA | NA |
| 193 | 28.37 | radiation | 20 | 1440 | < th | dose independent | rect. | 6 | 12 |
| 236 | 28.37 | radiation | 20 | 1440 | < th | dose independent | rect. | 23 | 19 |
| 310 | 28.41 | radiation | 20 | 1440 | > th | dose independent | sin | 20 | NA |
| 450 | 28.50 | radiation | 20 | 1440 | < th | dose dependent | no | NA | NA |
| 472 | 28.50 | radiation | 20 | 1440 | < th | dose dependent | rect. | 22 | 20 |
| 682 | 28.57 | radiation | 20 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 704 | 28.57 | radiation | 20 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 731 | 28.60 | radiation | 20 | 1440 | > th | dose independent | no | NA | NA |
| 925 | 28.68 | radiation | 20 | 1440 | > th | dose independent | rect. | 9 | 4 |