Os06g0664800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1).
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Os06g0664800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.31 | 0.473 | 6.55 | 0.174 | 1.22 | -1.16 | -0.562 | -3.32 | 0.278 | 11.6 | 40.08 | 4519 | -- | -- |
| 107.84 | 0.484 | 6.55 | 0.588 | 1.2 | -0.812 | -0.64 | -- | 0.418 | 11.7 | 29.81 | 1546 | -- | -- |
| 102.63 | 0.472 | 6.55 | 0.148 | 1.22 | -1.17 | -- | -3.43 | 0.268 | 11.7 | 40.92 | 4528 | -- | -- |
| 108.42 | 0.485 | 6.57 | 0.479 | 1.06 | -0.82 | -- | -- | 0.332 | 11.9 | 16.51 | 2680 | -- | -- |
| 178.75 | 0.623 | 6.61 | 0.286 | -- | -1.19 | -- | -2.76 | 0.283 | -- | 36.34 | 2615 | -- | -- |
| 129.14 | 0.533 | 6.59 | 0.459 | 1.21 | -- | -0.537 | -- | 0.23 | 11.7 | -- | -- | -- | -- |
| 130.37 | 0.535 | 6.59 | 0.438 | 1.22 | -- | -- | -- | 0.228 | 11.7 | -- | -- | -- | -- |
| 166.73 | 0.601 | 6.56 | 0.465 | -- | -1.44 | -- | -- | 0.473 | -- | -6.205 | 2561 | -- | -- |
| 114.2 | 0.498 | 6.57 | -- | 1.06 | -0.817 | -- | -- | 0.326 | 11.7 | 15.27 | 2707 | -- | -- |
| 223.24 | 0.698 | 6.61 | 0.403 | -- | -- | -- | -- | 0.213 | -- | -- | -- | -- | -- |
| 135.42 | 0.544 | 6.6 | -- | 1.21 | -- | -- | -- | 0.179 | 11.7 | -- | -- | -- | -- |
| 172.41 | 0.612 | 6.57 | -- | -- | -1.42 | -- | -- | 0.419 | -- | -0.1588 | 2562 | -- | -- |
| 227.52 | 0.704 | 6.63 | -- | -- | -- | -- | -- | 0.169 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.47 | temperature | 30 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 2 | 95.51 | temperature | 30 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 4 | 95.61 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 40 | 95.86 | temperature | 30 | 14400 | > th | dose dependent | sin | 7 | NA |
| 65 | 95.97 | temperature | 30 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 66 | 95.97 | temperature | 30 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 84 | 95.98 | temperature | 30 | 14400 | < th | dose independent | rect. | 23 | 12 |
| 85 | 95.98 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 16 |
| 191 | 96.42 | temperature | 30 | 14400 | > th | dose independent | sin | 7 | NA |
| 193 | 96.42 | temperature | 30 | 14400 | < th | dose independent | sin | 7 | NA |
| 246 | 96.60 | temperature | 30 | 14400 | > th | dose dependent | no | NA | NA |
| 372 | 96.65 | temperature | 30 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 374 | 96.65 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 375 | 96.66 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 8 |
| 377 | 96.66 | temperature | 30 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 381 | 96.67 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 562 | 96.85 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 22 |
| 566 | 96.87 | temperature | 30 | 14400 | > th | dose independent | rect. | 13 | 23 |
| 572 | 96.91 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 21 |
| 598 | 96.95 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 21 |
| 636 | 96.98 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 703 | 96.99 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 841 | 97.03 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 884 | 97.09 | temperature | 30 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 930 | 97.20 | temperature | 30 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 931 | 97.20 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 949 | 97.21 | temperature | 25 | 14400 | > th | dose dependent | rect. | 7 | 1 |