Os06g0661900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF266, plant family protein.
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Os06g0661900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF266, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.57 | 0.478 | 9.18 | 0.88 | 1.43 | -0.978 | -0.462 | 2 | 0.85 | 1.71 | 2 | 7 | -- | -- |
| 113.67 | 0.497 | 9.26 | 0.387 | 0.521 | -0.847 | -0.84 | -- | 0.589 | 1.49 | 10.02 | 172 | -- | -- |
| 116.66 | 0.503 | 9.31 | 0.474 | 0.93 | -0.606 | -- | 1.06 | 0.51 | 2.02 | 10.22 | 171 | -- | -- |
| 115.09 | 0.5 | 9.29 | 0.403 | 0.558 | -0.906 | -- | -- | 0.521 | 1.72 | 10.01 | 185 | -- | -- |
| 114.32 | 0.498 | 9.29 | 0.279 | -- | -1.26 | -- | 0.643 | 0.467 | -- | 5.27 | 204 | -- | -- |
| 134.8 | 0.544 | 9.3 | 0.263 | 1.41 | -- | -0.598 | -- | 0.444 | 1.71 | -- | -- | -- | -- |
| 136.2 | 0.547 | 9.3 | 0.282 | 1.41 | -- | -- | -- | 0.447 | 1.69 | -- | -- | -- | -- |
| 116.54 | 0.503 | 9.29 | 0.289 | -- | -1.26 | -- | -- | 0.473 | -- | 5.347 | 204 | -- | -- |
| 119.17 | 0.508 | 9.31 | -- | 0.475 | -0.902 | -- | -- | 0.405 | 1.73 | 8.319 | 198 | -- | -- |
| 257.83 | 0.75 | 9.28 | 0.34 | -- | -- | -- | -- | 0.479 | -- | -- | -- | -- | -- |
| 138.3 | 0.55 | 9.31 | -- | 1.42 | -- | -- | -- | 0.416 | 1.69 | -- | -- | -- | -- |
| 118.56 | 0.507 | 9.29 | -- | -- | -1.27 | -- | -- | 0.448 | -- | 5.958 | 202 | -- | -- |
| 260.87 | 0.754 | 9.29 | -- | -- | -- | -- | -- | 0.441 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.70 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 3 | 98.16 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 4 | 98.41 | wind | 7 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 9 | 98.83 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 9 |
| 12 | 99.20 | wind | 7 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 13 | 99.30 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 14 |
| 14 | 99.31 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 12 |
| 21 | 99.43 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 22 | 99.45 | radiation | 10 | 1440 | < th | dose dependent | sin | 20 | NA |
| 68 | 100.80 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 69 | 100.80 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 80 | 100.89 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 203 | 102.55 | radiation | 10 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 205 | 102.62 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 229 | 102.99 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 9 |
| 235 | 103.02 | radiation | 10 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 251 | 103.12 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 262 | 103.28 | radiation | 10 | 1440 | > th | dose independent | sin | 0 | NA |
| 268 | 103.32 | humidity | 60 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 270 | 103.32 | humidity | 60 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 272 | 103.32 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 323 | 103.32 | humidity | 60 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 325 | 103.32 | humidity | 60 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 327 | 103.32 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 350 | 103.32 | humidity | 80 | 1440 | < th | dose dependent | rect. | 8 | 6 |
| 413 | 103.54 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 431 | 103.57 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 565 | 103.86 | humidity | 80 | 1440 | < th | dose dependent | sin | 4 | NA |
| 586 | 104.01 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 608 | 104.17 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 612 | 104.22 | radiation | 10 | 1440 | > th | dose independent | rect. | 5 | 9 |
| 642 | 104.31 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 717 | 104.61 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 773 | 104.88 | humidity | 50 | 90 | > th | dose dependent | rect. | 24 | 23 |
| 805 | 105.02 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 808 | 105.05 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 809 | 105.05 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 826 | 105.21 | radiation | 30 | 1440 | < th | dose independent | rect. | 16 | 16 |
| 900 | 105.43 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 937 | 105.62 | humidity | 50 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 999 | 105.95 | radiation | 10 | 1440 | < th | dose dependent | rect. | 2 | 16 |