Os06g0656800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Beta-Ig-H3/fasciclin domain containing protein.
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Os06g0656800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Beta-Ig-H3/fasciclin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 256.47 | 0.752 | 2.95 | 0.182 | 0.0629 | 8.8 | -0.766 | -24.5 | -0.0257 | 7.61 | 5.757e-05 | 8 | -- | -- |
| 270.47 | 0.772 | 2.93 | 0.217 | 0.0778 | 1.61 | -1.03 | -- | -0.057 | 6.37 | 5.757e-05 | 8 | -- | -- |
| 257.5 | 0.747 | 2.95 | 0.17 | 0.115 | 8.42 | -- | -22.8 | -0.0169 | 11.7 | 0.02774 | 6 | -- | -- |
| 269.59 | 0.765 | 2.93 | 0.178 | 0.125 | 2.07 | -- | -- | -0.0344 | 9.36 | 0.4584 | 5 | -- | -- |
| 257.86 | 0.748 | 2.94 | 0.19 | -- | 7.26 | -- | -19.6 | -0.0044 | -- | 3.385e-07 | 5 | -- | -- |
| 273.02 | 0.775 | 2.93 | 0.233 | 0.0922 | -- | -0.946 | -- | -0.0595 | 6.55 | -- | -- | -- | -- |
| 275.04 | 0.777 | 2.93 | 0.222 | 0.106 | -- | -- | -- | -0.0555 | 8.88 | -- | -- | -- | -- |
| 270.31 | 0.766 | 2.93 | 0.189 | -- | 2.07 | -- | -- | -0.0344 | -- | 0.4584 | 5 | -- | -- |
| 270.48 | 0.766 | 2.93 | -- | 0.112 | 2.11 | -- | -- | -0.0653 | 9.55 | 0.4995 | 5 | -- | -- |
| 275.68 | 0.776 | 2.93 | 0.222 | -- | -- | -- | -- | -0.0548 | -- | -- | -- | -- | -- |
| 276.33 | 0.778 | 2.93 | -- | 0.106 | -- | -- | -- | -0.0802 | 8.73 | -- | -- | -- | -- |
| 271.21 | 0.767 | 2.93 | -- | -- | 2.09 | -- | -- | -0.0637 | -- | 0.4673 | 5 | -- | -- |
| 276.97 | 0.777 | 2.94 | -- | -- | -- | -- | -- | -0.0794 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 248.49 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 5 | 248.49 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 9 | 249.76 | wind | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 10 | 249.89 | wind | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 13 | 250.56 | humidity | 50.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 105 | 250.56 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 249 | 253.24 | precipitation | 0.1 | 10 | < th | dose independent | sin | 6 | NA |
| 250 | 253.24 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 6 | NA |
| 255 | 253.63 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 5 | NA |
| 257 | 253.71 | precipitation | 0.1 | 10 | > th | dose independent | sin | 6 | NA |
| 268 | 254.25 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 24 | 3 |
| 269 | 254.33 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 22 | 7 |
| 272 | 254.36 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 22 | 7 |
| 276 | 254.52 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 24 | 3 |
| 280 | 254.56 | wind | 7.0 | 1440 | < th | dose independent | rect. | 24 | 9 |
| 343 | 254.82 | wind | 5.0 | 720 | > th | dose independent | rect. | 1 | 2 |
| 344 | 254.83 | wind | 5.0 | 720 | > th | dose dependent | rect. | 1 | 2 |
| 387 | 254.96 | wind | 5.0 | 720 | > th | dose independent | rect. | 24 | 4 |
| 478 | 255.41 | wind | 7.0 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 484 | 255.51 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 485 | 255.53 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 1 | 6 |
| 488 | 255.57 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 494 | 255.69 | wind | 7.0 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 498 | 255.78 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 499 | 255.79 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 507 | 255.88 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 510 | 255.91 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 514 | 255.91 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 515 | 255.92 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 541 | 256.20 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 543 | 256.21 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 24 | 1 |
| 544 | 256.21 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 24 | 1 |
| 545 | 256.21 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 12 | 2 |
| 569 | 256.27 | wind | 3.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 572 | 256.27 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 615 | 256.44 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 627 | 256.49 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 630 | 256.52 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 637 | 256.55 | wind | 3.0 | 1440 | < th | dose independent | rect. | 23 | 4 |
| 664 | 256.73 | wind | 3.0 | 1440 | < th | dose independent | rect. | 1 | 2 |
| 718 | 256.97 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 722 | 256.99 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 757 | 257.19 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 762 | 257.21 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 764 | 257.22 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 6 |
| 771 | 257.26 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 790 | 257.35 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 814 | 257.42 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 24 | 2 |
| 830 | 257.49 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 24 | 6 |
| 863 | 257.53 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 878 | 257.56 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 6 |
| 904 | 257.59 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 6 |
| 927 | 257.64 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 941 | 257.66 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 952 | 257.69 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 962 | 257.72 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 991 | 257.76 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 17 | 5 |