Os06g0656700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0656700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.8 | 0.508 | 6.4 | 2.2 | 1.17 | -1.74 | -0.782 | -0.953 | 0.182 | 23.3 | 26.91 | 1386 | -- | -- |
| 116.9 | 0.504 | 6.41 | 2.06 | 0.985 | -1.65 | -0.781 | -- | 0.175 | 23.4 | 31 | 1103 | -- | -- |
| 119.35 | 0.509 | 6.39 | 2.22 | 1.2 | -1.72 | -- | -0.909 | 0.185 | 23.4 | 27 | 1468 | -- | -- |
| 119.4 | 0.509 | 6.41 | 2.06 | 1.01 | -1.67 | -- | -- | 0.17 | 23.4 | 30.03 | 1111 | -- | -- |
| 166.11 | 0.6 | 6.41 | 1.86 | -- | -2.36 | -- | 0.372 | 0.0736 | -- | 30.93 | 896 | -- | -- |
| 158.59 | 0.59 | 6.33 | 2.53 | 1.23 | -- | -0.708 | -- | 0.517 | 23.5 | -- | -- | -- | -- |
| 160.75 | 0.594 | 6.33 | 2.56 | 1.23 | -- | -- | -- | 0.52 | 23.5 | -- | -- | -- | -- |
| 166.18 | 0.6 | 6.41 | 1.92 | -- | -2.36 | -- | -- | 0.0803 | -- | 30.61 | 902 | -- | -- |
| 140.35 | 0.552 | 6.53 | -- | 1.19 | -2.25 | -- | -- | -0.384 | 23.5 | 24.81 | 47520 | -- | -- |
| 255.86 | 0.747 | 6.3 | 2.59 | -- | -- | -- | -- | 0.534 | -- | -- | -- | -- | -- |
| 332.85 | 0.853 | 6.4 | -- | 1.26 | -- | -- | -- | 0.236 | 23.7 | -- | -- | -- | -- |
| 229.18 | 0.705 | 6.52 | -- | -- | -2.3 | -- | -- | -0.417 | -- | 26.59 | 47520 | -- | -- |
| 432.66 | 0.971 | 6.37 | -- | -- | -- | -- | -- | 0.247 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 20 |
| 5 | 115.28 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 20 |
| 9 | 115.39 | temperature | 10 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 23 | 115.86 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 29 | 116.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 49 | 116.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 88 | 116.66 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 15 |
| 93 | 116.69 | temperature | 30 | 1440 | < th | dose dependent | sin | 16 | NA |
| 198 | 117.18 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 218 | 117.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 4 |
| 222 | 117.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 22 |
| 227 | 117.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 22 |
| 253 | 117.35 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 22 |
| 264 | 117.38 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 297 | 117.46 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 383 | 117.63 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 468 | 117.77 | temperature | 10 | 1440 | > th | dose dependent | sin | 15 | NA |
| 639 | 118.05 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 663 | 118.11 | temperature | 25 | 720 | < th | dose dependent | sin | 22 | NA |
| 738 | 118.24 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 763 | 118.29 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 4 |
| 791 | 118.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 2 |
| 880 | 118.46 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 21 |
| 917 | 118.52 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 20 |