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Os06g0651600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Protein phosphatase type-2C.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0121) R2 : 0.474
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.574 (0.0294) R2dC : 0.443 R2C : 0.432
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.135 (0.0255) R2dN8 : 0.0417 R2N8 : 0.0302
σ : 0.229
deviance : 23.88
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C
peak time of C : 22.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
19.29 0.206 11.2 -0.24 0.607 0.477 -0.00216 1.47 0.112 22.4 18.8 1004 -- --
22.39 0.22 11.2 -0.083 0.611 0.384 -0.222 -- 0.144 22.3 17.73 928 -- --
19.29 0.205 11.2 -0.241 0.607 0.478 -- 1.47 0.112 22.4 18.8 1009 -- --
22.59 0.221 11.2 -0.105 0.598 0.291 -- -- 0.144 22.3 17.7 942 -- --
41.03 0.298 11.2 -0.266 -- 0.478 -- 1.68 0.1 -- 18.9 1295 -- --
22.97 0.225 11.2 -0.166 0.574 -- -0.26 -- 0.117 22.2 -- -- -- --
23.24 0.226 11.2 -0.156 0.575 -- -- -- 0.117 22.3 -- -- -- --
43.16 0.306 11.1 -0.126 -- 0.131 -- -- 0.127 -- 17.7 1438 -- --
22.86 0.223 11.2 -- 0.597 0.303 -- -- 0.148 22.3 17.9 928 -- --
43.31 0.308 11.1 -0.147 -- -- -- -- 0.119 -- -- -- -- --
23.88 0.229 11.2 -- 0.574 -- -- -- 0.135 22.2 -- -- -- --
43.5 0.307 11.1 -- -- 0.23 -- -- 0.149 -- 17.8 1450 -- --
43.89 0.309 11.1 -- -- -- -- -- 0.135 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.03 temperature 15 720 > th dose dependent rect. 3 4
3 19.13 temperature 15 720 > th dose dependent rect. 2 7
8 19.30 temperature 30 720 < th dose dependent rect. 24 10
13 19.39 temperature 20 720 < th dose dependent sin 23 NA
15 19.40 temperature 20 720 < th dose dependent rect. 6 15
18 19.41 temperature 20 720 < th dose dependent rect. 24 22
21 19.42 temperature 20 720 < th dose dependent rect. 14 18
28 19.43 temperature 20 720 < th dose dependent rect. 16 16
38 19.44 temperature 20 720 < th dose dependent rect. 3 19
77 19.47 temperature 20 720 < th dose dependent no NA NA
78 19.47 temperature 20 720 < th dose dependent rect. 6 7
95 19.48 temperature 20 720 < th dose independent rect. 6 13
97 19.48 temperature 20 720 < th dose dependent rect. 6 5
115 19.48 temperature 20 720 < th dose dependent rect. 6 23
142 19.50 temperature 15 720 > th dose dependent sin 7 NA
143 19.50 temperature 20 720 < th dose dependent sin 12 NA
145 19.50 temperature 20 720 < th dose dependent rect. 6 2
190 19.52 temperature 20 720 < th dose dependent rect. 24 13
205 19.53 temperature 20 720 < th dose dependent rect. 24 9
240 19.55 temperature 20 720 < th dose dependent sin 7 NA
259 19.56 temperature 20 720 < th dose independent rect. 6 11
299 19.58 temperature 20 720 < th dose independent rect. 6 3
300 19.58 temperature 20 720 < th dose independent rect. 6 5
346 19.61 temperature 20 720 < th dose dependent rect. 24 5
404 19.71 temperature 25 10 > th dose dependent sin 2 NA
413 19.71 temperature 15 720 > th dose dependent rect. 22 16
418 19.72 temperature 20 1440 < th dose dependent rect. 14 9
420 19.73 temperature 25 90 > th dose dependent sin 3 NA
422 19.73 temperature 20 1440 < th dose dependent rect. 19 4
424 19.73 temperature 20 1440 < th dose dependent rect. 16 7
440 19.74 temperature 20 1440 < th dose dependent sin 19 NA
449 19.75 temperature 20 1440 < th dose dependent rect. 19 2
465 19.77 temperature 20 720 < th dose dependent rect. 24 1
503 19.79 wind 1 43200 < th dose dependent rect. 18 2
533 19.81 humidity 90 43200 > th dose independent rect. 10 2
556 19.83 temperature 30 720 < th dose dependent sin 7 NA
591 19.88 humidity 90 1440 < th dose independent rect. 11 2
644 19.93 temperature 25 720 > th dose independent rect. 5 5
646 19.93 temperature 25 720 > th dose independent rect. 3 8
647 19.93 wind 5 43200 > th dose dependent rect. 3 4
695 19.97 temperature 20 1440 > th dose independent rect. 11 3
707 19.98 humidity 90 43200 > th dose dependent rect. 11 1
708 19.98 wind 5 43200 > th dose dependent rect. 4 2
716 19.99 humidity 90 43200 < th dose independent rect. 11 1
739 20.01 temperature 20 720 < th dose independent sin 0 NA
740 20.01 humidity 90 1440 > th dose independent rect. 12 1
748 20.01 humidity 90 1440 > th dose dependent rect. 12 1
767 20.02 wind 1 43200 < th dose dependent rect. 17 4
801 20.05 wind 5 43200 > th dose independent rect. 3 3
811 20.05 wind 1 14400 < th dose dependent rect. 10 12
816 20.06 wind 5 43200 < th dose independent rect. 3 1
819 20.06 temperature 20 1440 < th dose independent rect. 7 16
822 20.06 temperature 20 720 < th dose independent rect. 24 20
832 20.07 wind 5 43200 > th dose independent rect. 3 1
834 20.07 temperature 30 90 < th dose independent rect. 24 16
838 20.07 wind 3 14400 < th dose dependent rect. 11 1
848 20.08 temperature 20 1440 < th dose independent sin 21 NA
849 20.08 temperature 20 1440 < th dose independent rect. 12 3
851 20.08 wind 7 43200 < th dose independent rect. 3 4
908 20.10 temperature 25 90 > th dose dependent rect. 18 23
935 20.12 temperature 20 1440 < th dose dependent rect. 12 1
946 20.12 temperature 25 10 > th dose dependent rect. 19 21
950 20.13 temperature 20 1440 < th dose independent rect. 12 6
970 20.14 temperature 20 1440 > th dose independent rect. 6 16
990 20.15 temperature 20 720 < th dose independent rect. 24 9
992 20.15 temperature 20 1440 < th dose independent rect. 17 10