Os06g0651300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, C2H2-type domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0651300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Zinc finger, C2H2-type domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43 | 0.308 | 9.02 | -0.196 | 0.393 | -0.82 | 0.727 | -0.611 | 0.111 | 21.7 | 24.9 | 87 | -- | -- |
| 43.51 | 0.307 | 9.03 | -0.282 | 0.395 | -0.736 | 0.607 | -- | 0.101 | 21.5 | 25 | 80 | -- | -- |
| 44.73 | 0.311 | 9.02 | -0.256 | 0.392 | -0.77 | -- | -0.3 | 0.11 | 21.2 | 24.81 | 95 | -- | -- |
| 44.81 | 0.312 | 9.03 | -0.296 | 0.393 | -0.734 | -- | -- | 0.1 | 21.2 | 24.9 | 77 | -- | -- |
| 49.19 | 0.327 | 9.01 | -0.16 | -- | -0.787 | -- | -0.888 | 0.112 | -- | 27.6 | 493 | -- | -- |
| 51.76 | 0.337 | 9 | -0.11 | 0.363 | -- | 0.561 | -- | 0.239 | 20.3 | -- | -- | -- | -- |
| 52.65 | 0.34 | 9 | -0.125 | 0.368 | -- | -- | -- | 0.24 | 19.9 | -- | -- | -- | -- |
| 50.09 | 0.33 | 9.02 | -0.317 | -- | -0.754 | -- | -- | 0.0811 | -- | 28.5 | 486 | -- | -- |
| 46.9 | 0.321 | 9.02 | -- | 0.407 | -0.615 | -- | -- | 0.155 | 21 | 24.74 | 44 | -- | -- |
| 60.01 | 0.362 | 8.99 | -0.129 | -- | -- | -- | -- | 0.236 | -- | -- | -- | -- | -- |
| 53.07 | 0.341 | 9 | -- | 0.369 | -- | -- | -- | 0.254 | 19.9 | -- | -- | -- | -- |
| 52.6 | 0.338 | 9.01 | -- | -- | -0.643 | -- | -- | 0.133 | -- | 28.6 | 471 | -- | -- |
| 60.45 | 0.363 | 8.99 | -- | -- | -- | -- | -- | 0.25 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.33 | temperature | 25 | 30 | < th | dose dependent | sin | 16 | NA |
| 4 | 42.36 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 20 |
| 8 | 42.39 | temperature | 25 | 10 | < th | dose dependent | rect. | 6 | 22 |
| 9 | 42.41 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 18 |
| 11 | 42.43 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 16 |
| 13 | 42.44 | temperature | 25 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 16 | 42.48 | temperature | 25 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 62 | 42.85 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 12 |
| 98 | 42.94 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 23 |
| 99 | 42.95 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 14 |
| 101 | 42.95 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 106 | 42.99 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 11 |
| 113 | 43.00 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 115 | 43.01 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 151 | 43.08 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 159 | 43.09 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 160 | 43.09 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 168 | 43.11 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 196 | 43.15 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 467 | 43.84 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 16 |
| 500 | 43.89 | wind | 1 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 550 | 43.95 | wind | 1 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 595 | 44.01 | temperature | 25 | 720 | < th | dose independent | rect. | 11 | 15 |
| 608 | 44.02 | wind | 5 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 653 | 44.10 | temperature | 25 | 720 | < th | dose independent | sin | 17 | NA |
| 659 | 44.11 | temperature | 10 | 10 | > th | dose dependent | sin | 13 | NA |
| 698 | 44.18 | temperature | 20 | 90 | > th | dose independent | rect. | 14 | 15 |
| 707 | 44.20 | temperature | 25 | 720 | < th | dose independent | rect. | 13 | 12 |
| 756 | 44.28 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 786 | 44.35 | wind | 5 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 812 | 44.39 | temperature | 15 | 90 | > th | dose dependent | rect. | 14 | 15 |
| 840 | 44.45 | temperature | 20 | 10 | > th | dose independent | rect. | 15 | 15 |
| 855 | 44.49 | wind | 3 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 909 | 44.57 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 17 |