Os06g0651200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0651200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 290.01 | 0.8 | 11.6 | -2.17 | 2.13 | -2.1 | 1.23 | -0.185 | -1.1 | 5.58 | 84.43 | 688 | -- | -- |
| 290.1 | 0.793 | 11.6 | -2.18 | 2.12 | -2.09 | 1.15 | -- | -1.1 | 5.57 | 84.37 | 688 | -- | -- |
| 292.9 | 0.797 | 11.6 | -2.2 | 2.1 | -2.02 | -- | 0.216 | -1.1 | 5.42 | 84.47 | 688 | -- | -- |
| 293.03 | 0.797 | 11.6 | -2.18 | 2.1 | -2.02 | -- | -- | -1.1 | 5.41 | 84.52 | 687 | -- | -- |
| 375.06 | 0.902 | 11.6 | -2.56 | -- | -2.1 | -- | -0.262 | -1.09 | -- | 75 | 1180 | -- | -- |
| 393.52 | 0.93 | 11.6 | -2.31 | 1.48 | -- | -0.768 | -- | -0.953 | 2.98 | -- | -- | -- | -- |
| 395.35 | 0.931 | 11.6 | -2.3 | 1.48 | -- | -- | -- | -0.949 | 3.11 | -- | -- | -- | -- |
| 373.91 | 0.901 | 11.7 | -2.57 | -- | -2.15 | -- | -- | -1.18 | -- | 75 | 1180 | -- | -- |
| 407.73 | 0.94 | 11.6 | -- | 2.18 | -2.19 | -- | -- | -1.05 | 5.49 | 86.48 | 626 | -- | -- |
| 520.41 | 1.07 | 11.6 | -2.23 | -- | -- | -- | -- | -0.91 | -- | -- | -- | -- | -- |
| 534.28 | 1.08 | 11.6 | -- | 1.44 | -- | -- | -- | -0.693 | 3.11 | -- | -- | -- | -- |
| 487.72 | 1.03 | 11.6 | -- | -- | -2.93 | -- | -- | -1.03 | -- | 86.9 | 1193 | -- | -- |
| 651.93 | 1.19 | 11.6 | -- | -- | -- | -- | -- | -0.663 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 291.95 | humidity | 80 | 1440 | < th | dose independent | rect. | 1 | 14 |
| 3 | 292.09 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 11 |
| 7 | 292.18 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 15 |
| 10 | 292.34 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 12 |
| 22 | 293.21 | humidity | 80 | 720 | > th | dose dependent | rect. | 7 | 17 |
| 25 | 293.42 | humidity | 80 | 1440 | < th | dose independent | sin | 4 | NA |
| 29 | 293.72 | humidity | 80 | 1440 | > th | dose independent | sin | 4 | NA |
| 55 | 295.48 | humidity | 70 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 60 | 295.92 | humidity | 70 | 720 | > th | dose dependent | rect. | 5 | 23 |
| 74 | 296.62 | humidity | 70 | 720 | > th | dose dependent | rect. | 7 | 21 |
| 83 | 297.08 | humidity | 70 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 90 | 297.39 | humidity | 70 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 97 | 297.69 | humidity | 70 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 103 | 297.88 | humidity | 70 | 720 | > th | dose dependent | no | NA | NA |
| 105 | 297.96 | humidity | 90 | 1440 | < th | dose dependent | rect. | 23 | 15 |
| 114 | 298.20 | humidity | 70 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 116 | 298.22 | humidity | 80 | 720 | > th | dose independent | rect. | 7 | 15 |
| 126 | 298.60 | humidity | 70 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 128 | 298.66 | humidity | 80 | 720 | > th | dose independent | rect. | 7 | 17 |
| 134 | 298.79 | humidity | 80 | 720 | > th | dose independent | rect. | 23 | 20 |
| 143 | 298.99 | humidity | 90 | 1440 | < th | dose dependent | sin | 6 | NA |
| 155 | 299.29 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 219 | 300.62 | humidity | 80 | 720 | > th | dose independent | rect. | 21 | 22 |
| 302 | 301.99 | humidity | 80 | 720 | > th | dose independent | rect. | 5 | 23 |
| 313 | 302.28 | humidity | 80 | 720 | > th | dose independent | rect. | 7 | 21 |
| 327 | 302.49 | humidity | 80 | 720 | > th | dose dependent | sin | 20 | NA |
| 349 | 302.88 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 396 | 303.53 | humidity | 80 | 720 | > th | dose independent | rect. | 16 | 23 |
| 398 | 303.56 | humidity | 80 | 720 | < th | dose independent | rect. | 1 | 20 |
| 412 | 303.74 | humidity | 80 | 720 | > th | dose independent | rect. | 12 | 23 |
| 435 | 304.09 | humidity | 80 | 720 | > th | dose independent | sin | 21 | NA |
| 441 | 304.22 | humidity | 80 | 720 | > th | dose independent | no | NA | NA |
| 454 | 304.36 | humidity | 50 | 1440 | > th | dose dependent | rect. | 23 | 16 |
| 458 | 304.45 | humidity | 50 | 1440 | > th | dose dependent | rect. | 1 | 14 |
| 464 | 304.55 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 494 | 304.90 | humidity | 80 | 720 | > th | dose independent | rect. | 3 | 23 |
| 532 | 305.37 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 20 |
| 569 | 305.73 | humidity | 70 | 1440 | > th | dose dependent | rect. | 8 | 7 |
| 571 | 305.74 | humidity | 70 | 1440 | > th | dose dependent | rect. | 4 | 11 |
| 596 | 306.09 | humidity | 50 | 1440 | > th | dose dependent | sin | 4 | NA |
| 623 | 306.42 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 16 |
| 675 | 306.92 | humidity | 80 | 720 | < th | dose independent | rect. | 5 | 20 |
| 699 | 307.10 | humidity | 80 | 720 | < th | dose independent | rect. | 17 | 23 |
| 712 | 307.19 | humidity | 80 | 720 | > th | dose independent | rect. | 9 | 23 |
| 848 | 308.35 | humidity | 80 | 720 | < th | dose independent | rect. | 15 | 23 |
| 856 | 308.42 | humidity | 80 | 720 | < th | dose independent | no | NA | NA |
| 903 | 308.96 | humidity | 80 | 720 | < th | dose independent | rect. | 9 | 23 |
| 923 | 309.12 | humidity | 80 | 720 | < th | dose independent | rect. | 13 | 23 |
| 929 | 309.18 | humidity | 80 | 720 | < th | dose independent | rect. | 11 | 23 |