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Os06g0651100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to NADPH HC toxin reductase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0254) R2 : 0.734
β1 : 0.892 (0.0929) R2dD : 0.0558 R2D : 0.0437
β2 : 2.24 (0.065) R2dC : 0.692 R2C : 0.68
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0818 (0.0542) R2dN8 : 0.00178 R2N8 : -0.00447
σ : 0.477
deviance : 103.76
__
_____
C
peak time of C : 16.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
93.74 0.455 10.5 0.564 2.23 0.55 1.16 1.49 0.189 16.4 91.1 5211 -- --
94.36 0.452 10.6 0.796 2.26 0.574 1.15 -- 0.218 16.2 85.07 8853 -- --
97.34 0.46 10.5 0.558 2.23 0.553 -- 1.61 0.193 16.4 90.99 5236 -- --
98.38 0.462 10.6 0.821 2.26 0.518 -- -- 0.239 16.3 83.47 8856 -- --
297.31 0.807 10.6 1.03 -- -1.37 -- -1.27 -0.188 -- 90.99 5236 -- --
99.81 0.468 10.6 0.881 2.23 -- 1.2 -- 0.0753 16.3 -- -- -- --
103.76 0.477 10.6 0.892 2.24 -- -- -- 0.0818 16.3 -- -- -- --
278.22 0.78 10.6 0.992 -- -1.32 -- -- -0.216 -- 83.47 8856 -- --
115.96 0.502 10.6 -- 2.22 0.718 -- -- 0.224 16.3 83.99 7309 -- --
373.11 0.903 10.6 0.803 -- -- -- -- 0.0225 -- -- -- -- --
124.75 0.522 10.6 -- 2.22 -- -- -- -0.0176 16.3 -- -- -- --
303.9 0.815 10.7 -- -- -1.26 -- -- -0.312 -- 83.47 8856 -- --
390.14 0.922 10.6 -- -- -- -- -- -0.0667 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 81.65 temperature 20.0 30 > th dose independent rect. 18 7
3 82.47 temperature 10.0 270 > th dose dependent rect. 16 8
16 84.06 temperature 20.0 270 > th dose independent rect. 16 7
69 86.58 temperature 30.0 30 < th dose independent rect. 12 6
75 86.81 precipitation 0.1 270 < th dose independent rect. 12 15
76 86.81 precipitation 0.1 270 < th dose dependent rect. 12 15
84 86.96 atmosphere 1010.0 270 < th dose independent rect. 16 7
91 87.11 wind 1.0 270 > th dose independent rect. 16 7
93 87.12 temperature 10.0 1440 > th dose independent rect. 6 7
96 87.12 atmosphere 995.0 1440 > th dose independent rect. 6 7
97 87.12 temperature 10.0 1440 > th dose independent rect. 13 17
104 87.20 temperature 20.0 10 > th dose independent rect. 18 18
107 87.24 temperature 10.0 270 > th dose independent rect. 3 9
108 87.24 atmosphere 995.0 270 > th dose independent rect. 3 9
109 87.24 atmosphere 1015.0 270 < th dose independent rect. 3 9
110 87.24 temperature 10.0 270 > th dose independent rect. 12 15
119 87.36 temperature 15.0 270 > th dose independent rect. 23 16
124 87.38 wind 9.0 270 < th dose independent rect. 3 8
125 87.40 precipitation 0.1 270 < th dose independent rect. 3 9
126 87.40 precipitation 0.1 270 < th dose dependent rect. 3 9
137 87.50 humidity 50.0 270 > th dose independent rect. 3 8
139 87.55 temperature 30.0 90 < th dose dependent rect. 14 15
147 87.65 atmosphere 995.0 270 > th dose independent rect. 12 15
151 87.67 wind 9.0 270 < th dose independent rect. 11 16
154 87.70 wind 1.0 10 > th dose independent rect. 18 18
163 87.88 humidity 60.0 30 > th dose independent rect. 12 6
181 88.05 atmosphere 995.0 270 > th dose independent rect. 23 17
188 88.09 radiation 40.0 270 < th dose independent rect. 15 8
191 88.10 wind 9.0 270 < th dose independent rect. 15 8
195 88.18 atmosphere 1015.0 270 < th dose independent rect. 5 16
201 88.29 precipitation 0.1 270 < th dose independent rect. 23 16
202 88.29 precipitation 0.1 270 < th dose dependent rect. 23 16
203 88.30 temperature 15.0 270 > th dose independent rect. 9 8
204 88.30 temperature 10.0 270 > th dose independent rect. 15 8
208 88.31 atmosphere 1010.0 30 < th dose independent rect. 18 7
209 88.32 wind 9.0 270 < th dose independent rect. 23 16
212 88.35 precipitation 0.1 270 < th dose independent rect. 21 8
213 88.35 precipitation 0.1 270 < th dose dependent rect. 21 8
219 88.38 temperature 25.0 90 < th dose independent rect. 15 14
221 88.38 temperature 30.0 10 < th dose dependent rect. 14 16
225 88.40 atmosphere 1000.0 30 > th dose independent rect. 12 6
226 88.41 atmosphere 995.0 30 > th dose dependent rect. 12 6
227 88.42 temperature 10.0 30 > th dose dependent rect. 18 18
235 88.46 temperature 10.0 270 > th dose independent rect. 21 8
236 88.46 temperature 30.0 270 < th dose independent rect. 21 8
237 88.46 humidity 50.0 270 > th dose independent rect. 21 8
240 88.46 atmosphere 995.0 270 > th dose independent rect. 21 8
241 88.46 radiation 20.0 270 < th dose independent rect. 21 8
244 88.46 temperature 10.0 270 > th dose independent rect. 5 16
245 88.46 radiation 20.0 270 < th dose dependent rect. 21 8
249 88.47 wind 1.0 90 > th dose independent rect. 4 8
250 88.47 radiation 1.0 270 < th dose independent rect. 21 8
253 88.47 temperature 20.0 10 > th dose independent rect. 6 19
265 88.51 wind 9.0 270 < th dose independent rect. 21 8
274 88.55 temperature 10.0 270 > th dose dependent rect. 17 16
298 88.66 wind 9.0 270 < th dose independent rect. 5 16
303 88.68 radiation 20.0 43200 < th dose dependent rect. 19 7
323 88.80 temperature 10.0 1440 > th dose independent rect. 6 9
326 88.80 temperature 10.0 1440 > th dose independent rect. 15 15
330 88.82 atmosphere 1010.0 30 < th dose independent rect. 12 6
338 88.84 temperature 30.0 90 < th dose dependent rect. 23 6
341 88.87 temperature 10.0 30 > th dose independent rect. 12 6
344 88.87 temperature 10.0 30 > th dose independent rect. 18 18
345 88.88 precipitation 0.1 30 < th dose independent rect. 12 6
346 88.88 atmosphere 995.0 30 > th dose independent rect. 18 18
347 88.88 precipitation 0.1 30 < th dose dependent rect. 12 6
348 88.89 wind 9.0 30 < th dose independent rect. 12 6
350 88.89 atmosphere 1015.0 30 < th dose independent rect. 18 18
358 88.95 precipitation 0.1 90 < th dose independent rect. 14 15
359 88.95 precipitation 0.1 90 < th dose dependent rect. 14 15
365 88.99 temperature 25.0 90 < th dose independent rect. 23 6
369 89.01 temperature 30.0 270 < th dose independent rect. 23 17
373 89.03 wind 1.0 10 > th dose independent rect. 18 20
396 89.14 temperature 20.0 10 > th dose independent rect. 18 20
417 89.20 wind 7.0 270 < th dose independent rect. 17 16
418 89.20 precipitation 0.1 270 < th dose independent rect. 5 16
419 89.20 precipitation 0.1 270 < th dose dependent rect. 5 16
455 89.26 temperature 10.0 1440 > th dose independent rect. 13 6
467 89.26 temperature 10.0 1440 > th dose independent rect. 19 18
470 89.26 humidity 50.0 30 > th dose independent rect. 18 18
471 89.26 atmosphere 995.0 1440 > th dose independent rect. 19 18
476 89.27 humidity 50.0 270 > th dose independent rect. 12 16
483 89.30 wind 1.0 30 > th dose independent rect. 12 6
491 89.33 wind 9.0 30 < th dose independent rect. 18 18
495 89.34 wind 1.0 270 > th dose independent rect. 4 18
524 89.38 atmosphere 1015.0 270 < th dose independent rect. 9 8
525 89.38 temperature 10.0 270 > th dose independent rect. 17 16
529 89.41 radiation 1.0 270 > th dose independent rect. 9 8
535 89.43 precipitation 0.1 270 < th dose independent rect. 9 8
537 89.43 precipitation 0.1 270 < th dose dependent rect. 9 8
543 89.46 wind 1.0 90 > th dose independent rect. 4 10
545 89.46 atmosphere 1015.0 270 < th dose independent rect. 23 16
576 89.52 atmosphere 995.0 90 > th dose independent rect. 14 15
580 89.55 temperature 30.0 10 < th dose independent rect. 14 4
582 89.55 precipitation 0.1 30 < th dose independent rect. 18 18
586 89.55 precipitation 0.1 30 < th dose dependent rect. 18 18
589 89.57 atmosphere 995.0 270 > th dose independent rect. 16 7
590 89.57 atmosphere 995.0 270 > th dose independent rect. 9 8
609 89.62 wind 9.0 270 < th dose independent rect. 9 8
618 89.65 precipitation 0.1 270 < th dose independent rect. 16 6
624 89.65 temperature 10.0 90 > th dose independent rect. 14 15
625 89.65 precipitation 0.1 270 < th dose dependent rect. 16 6
643 89.70 temperature 30.0 270 < th dose independent rect. 12 3
667 89.75 humidity 50.0 10 > th dose independent rect. 12 18
669 89.75 radiation 40.0 270 < th dose dependent rect. 16 6
677 89.77 wind 1.0 10 > th dose independent rect. 18 7
732 89.86 radiation 40.0 90 < th dose independent rect. 12 17
759 89.89 humidity 50.0 270 > th dose independent rect. 17 16
787 89.94 radiation 40.0 270 < th dose independent rect. 17 16
790 89.95 wind 9.0 90 < th dose independent rect. 14 15
792 89.96 atmosphere 1015.0 270 < th dose independent rect. 17 16
800 89.98 atmosphere 995.0 30 > th dose independent rect. 1 17
804 89.99 radiation 1.0 10 > th dose independent rect. 6 6
830 90.02 wind 1.0 270 > th dose independent rect. 22 6
831 90.02 humidity 50.0 270 > th dose independent rect. 10 8
832 90.02 precipitation 0.1 30 < th dose independent rect. 1 17
834 90.02 precipitation 0.1 30 < th dose dependent rect. 1 17
838 90.03 humidity 90.0 10 < th dose independent rect. 12 6
851 90.05 atmosphere 995.0 270 > th dose independent rect. 17 16
879 90.09 humidity 90.0 270 < th dose independent rect. 10 7
893 90.10 atmosphere 1015.0 30 < th dose dependent rect. 18 7
950 90.21 humidity 90.0 270 < th dose independent rect. 11 5
954 90.21 humidity 50.0 270 > th dose dependent rect. 21 8
969 90.23 atmosphere 995.0 270 > th dose independent rect. 5 16
970 90.23 wind 9.0 30 < th dose independent rect. 1 17
971 90.23 humidity 50.0 270 > th dose dependent rect. 22 6
998 90.26 radiation 10.0 10 < th dose dependent rect. 18 7