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Os06g0649700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Region of unknown function DM13, Skeletor domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.27 (0.0287) R2 : 0.68
β1 : 2.76 (0.105) R2dD : 0.501 R2D : 0.445
β2 : 1.1 (0.0683) R2dC : 0.183 R2C : 0.179
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.475 (0.0613) R2dN8 : 0.0566 R2N8 : -0.0121
σ : 0.54
deviance : 132.91
__
_____
C
peak time of C : 23.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
122.4 0.52 7.26 2.67 1.05 -0.618 0.0623 1.67 0.573 23.2 1006 175 -- --
126.63 0.524 7.25 2.73 1.06 -0.659 -0.0439 -- 0.572 23.2 1006 165 -- --
122.41 0.515 7.26 2.67 1.05 -0.616 -- 1.66 0.572 23.2 1006 174 -- --
126.64 0.524 7.25 2.73 1.06 -0.664 -- -- 0.57 23.2 1006 163 -- --
185.59 0.635 7.24 2.63 -- -0.95 -- 1.97 0.593 -- 1007 513 -- --
132.83 0.54 7.27 2.75 1.1 -- -0.133 -- 0.475 23.2 -- -- -- --
132.91 0.54 7.27 2.76 1.1 -- -- -- 0.475 23.1 -- -- -- --
191.87 0.645 7.22 2.7 -- -1.07 -- -- 0.6 -- 1007 568 -- --
314.29 0.826 7.29 -- 1.07 -1.04 -- -- 0.285 23.5 1008 1079 -- --
208.48 0.675 7.25 2.78 -- -- -- -- 0.485 -- -- -- -- --
333.25 0.854 7.34 -- 1.13 -- -- -- 0.168 23.3 -- -- -- --
377.99 0.905 7.29 -- -- -1.58 -- -- 0.275 -- 1008 830 -- --
412.82 0.948 7.32 -- -- -- -- -- 0.176 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 119.69 temperature 20 270 < th dose independent rect. 6 20
14 120.56 temperature 20 270 < th dose dependent sin 22 NA
15 120.59 wind 9 4320 < th dose independent rect. 15 18
17 120.60 temperature 20 270 > th dose independent rect. 12 16
19 120.64 wind 9 4320 > th dose independent rect. 15 17
27 120.74 temperature 20 270 < th dose dependent rect. 6 17
33 121.05 temperature 20 270 > th dose independent rect. 22 22
35 121.07 temperature 20 270 > th dose independent rect. 10 22
36 121.11 temperature 20 270 > th dose independent rect. 11 20
47 121.38 temperature 20 270 < th dose independent sin 21 NA
48 121.39 temperature 20 270 < th dose dependent rect. 6 20
50 121.41 atmosphere 1005 90 > th dose dependent rect. 23 23
53 121.44 wind 9 4320 > th dose independent rect. 17 15
56 121.44 wind 9 4320 > th dose dependent rect. 15 17
83 121.69 temperature 20 1440 < th dose dependent rect. 3 1
89 121.72 atmosphere 1005 90 > th dose dependent rect. 23 17
101 121.81 atmosphere 1005 10 > th dose dependent rect. 24 17
120 121.92 atmosphere 1010 720 > th dose dependent rect. 3 14
135 121.98 atmosphere 1005 90 > th dose dependent rect. 6 21
136 121.99 wind 9 4320 > th dose independent sin 12 NA
138 121.99 atmosphere 1005 90 > th dose dependent rect. 4 23
143 122.01 atmosphere 1010 720 > th dose dependent sin 2 NA
157 122.08 temperature 20 270 > th dose independent sin 21 NA
175 122.17 atmosphere 1005 90 > th dose dependent rect. 18 22
191 122.20 atmosphere 1005 10 > th dose dependent rect. 7 20
197 122.21 atmosphere 1005 10 > th dose dependent rect. 20 21
199 122.22 wind 7 4320 > th dose dependent sin 13 NA
203 122.23 temperature 20 10 < th dose independent rect. 7 19
211 122.26 wind 9 4320 < th dose independent sin 12 NA
215 122.27 wind 7 1440 < th dose independent rect. 17 5
238 122.32 atmosphere 995 90 > th dose dependent rect. 4 23
241 122.33 wind 9 720 > th dose independent rect. 19 15
243 122.34 wind 7 1440 < th dose independent rect. 18 2
244 122.34 temperature 15 4320 > th dose independent rect. 10 3
253 122.36 atmosphere 1005 270 > th dose dependent rect. 4 18
263 122.39 atmosphere 1005 10 > th dose dependent rect. 7 10
275 122.42 temperature 20 30 > th dose independent rect. 12 23
286 122.44 wind 7 1440 > th dose independent rect. 17 5
318 122.49 wind 9 4320 < th dose independent rect. 15 6
322 122.49 atmosphere 1005 90 > th dose dependent rect. 6 10
341 122.51 atmosphere 1005 10 > th dose dependent rect. 24 21
342 122.52 atmosphere 1005 90 > th dose dependent sin 22 NA
348 122.53 radiation 1 720 < th dose independent rect. 10 2
349 122.53 radiation 1 720 < th dose dependent rect. 10 2
372 122.56 atmosphere 1005 90 > th dose dependent rect. 13 23
382 122.58 atmosphere 1005 90 > th dose dependent no NA NA
383 122.58 wind 7 1440 > th dose dependent rect. 17 5
408 122.60 atmosphere 1015 10 < th dose dependent rect. 3 17
420 122.62 wind 9 4320 > th dose independent rect. 15 7
433 122.63 temperature 25 10 < th dose dependent rect. 11 8
435 122.63 atmosphere 1005 90 > th dose dependent rect. 10 23
442 122.65 atmosphere 1005 10 > th dose dependent sin 21 NA
474 122.69 wind 9 720 > th dose dependent rect. 19 15
478 122.70 temperature 20 30 > th dose independent rect. 3 17
479 122.70 atmosphere 1010 30 < th dose independent rect. 3 17
488 122.70 atmosphere 1005 10 > th dose dependent rect. 11 23
495 122.71 wind 7 1440 > th dose dependent rect. 15 7
512 122.72 wind 9 720 > th dose dependent rect. 21 13
591 122.82 atmosphere 1010 270 < th dose independent rect. 24 18
646 122.87 wind 7 720 > th dose dependent rect. 1 9
648 122.87 humidity 50 90 > th dose dependent rect. 1 17
677 122.90 atmosphere 1015 90 < th dose dependent rect. 1 19
857 123.03 atmosphere 1005 10 > th dose dependent rect. 5 12
908 123.06 atmosphere 1015 270 < th dose dependent rect. 23 19
970 123.11 temperature 20 270 > th dose independent rect. 10 10