Os06g0648200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0648200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.47 | 0.437 | 8.21 | 0.269 | 0.918 | 1.5 | -0.581 | 1.03 | -0.558 | 10.9 | 19.6 | 6515 | -- | -- |
| 87.44 | 0.436 | 8.17 | 0.366 | 0.914 | 1.22 | -0.588 | -- | -0.53 | 10.9 | 19.61 | 6480 | -- | -- |
| 87.89 | 0.437 | 8.21 | 0.258 | 0.923 | 1.51 | -- | 1.04 | -0.558 | 10.9 | 19.6 | 6515 | -- | -- |
| 88.8 | 0.439 | 8.17 | 0.331 | 0.927 | 1.22 | -- | -- | -0.535 | 10.9 | 19.63 | 6490 | -- | -- |
| 140.24 | 0.552 | 8.23 | 0.291 | -- | 1.65 | -- | 1.19 | -0.526 | -- | 19.5 | 6609 | -- | -- |
| 110.06 | 0.492 | 8.25 | -0.484 | 0.952 | -- | -0.56 | -- | -0.873 | 10.9 | -- | -- | -- | -- |
| 111.38 | 0.494 | 8.25 | -0.507 | 0.955 | -- | -- | -- | -0.875 | 10.9 | -- | -- | -- | -- |
| 141.57 | 0.554 | 8.17 | 0.345 | -- | 1.23 | -- | -- | -0.49 | -- | 19.7 | 6633 | -- | -- |
| 90.56 | 0.443 | 8.18 | -- | 0.991 | 1.05 | -- | -- | -0.561 | 10.9 | 19.9 | 6434 | -- | -- |
| 167.96 | 0.606 | 8.27 | -0.527 | -- | -- | -- | -- | -0.882 | -- | -- | -- | -- | -- |
| 118.14 | 0.508 | 8.24 | -- | 0.959 | -- | -- | -- | -0.819 | 10.9 | -- | -- | -- | -- |
| 143.14 | 0.557 | 8.21 | -- | -- | 1.06 | -- | -- | -0.598 | -- | 19.83 | 6581 | -- | -- |
| 175.29 | 0.618 | 8.26 | -- | -- | -- | -- | -- | -0.823 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.99 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 12 | 78.99 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 16 | 79.35 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 21 | 79.91 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 10 |
| 23 | 80.02 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 1 | 7 |
| 25 | 80.10 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 24 | 8 |
| 43 | 80.41 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 7 |
| 47 | 80.47 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 49 | 80.49 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 55 | 80.61 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 64 | 80.84 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 65 | 80.88 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 5 |
| 76 | 81.09 | wind | 1.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 79 | 81.12 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 96 | 81.31 | wind | 1.0 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 112 | 81.50 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 114 | 81.51 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 120 | 81.53 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 122 | 81.53 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 123 | 81.54 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 144 | 81.64 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 6 |
| 161 | 81.72 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 168 | 81.76 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 172 | 81.76 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 18 | 8 |
| 176 | 81.78 | wind | 1.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 186 | 81.80 | wind | 1.0 | 14400 | > th | dose independent | rect. | 22 | 10 |
| 187 | 81.80 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 207 | 81.82 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 17 | 9 |
| 226 | 81.86 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 244 | 81.90 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 288 | 82.00 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 11 |
| 293 | 82.01 | wind | 1.0 | 14400 | > th | dose independent | rect. | 22 | 7 |
| 302 | 82.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 9 |
| 320 | 82.06 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 16 | 9 |
| 327 | 82.08 | humidity | 50.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 345 | 82.10 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 362 | 82.12 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 368 | 82.12 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 380 | 82.14 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 415 | 82.22 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 423 | 82.24 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 11 |
| 449 | 82.28 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 16 |
| 506 | 82.38 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 8 |
| 512 | 82.39 | humidity | 90.0 | 43200 | < th | dose dependent | sin | 14 | NA |
| 537 | 82.43 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 538 | 82.43 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 570 | 82.48 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 669 | 82.62 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 687 | 82.63 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 689 | 82.63 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 691 | 82.63 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 700 | 82.64 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 729 | 82.66 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 753 | 82.69 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 835 | 82.78 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 836 | 82.78 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 842 | 82.78 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 863 | 82.80 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 10 | 4 |
| 866 | 82.81 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 869 | 82.81 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 875 | 82.82 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 876 | 82.82 | wind | 1.0 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 905 | 82.85 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 909 | 82.85 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 925 | 82.87 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 942 | 82.89 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 964 | 82.92 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 996 | 82.95 | humidity | 80.0 | 43200 | < th | dose independent | sin | 15 | NA |