Os06g0647700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0647700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.34 | 0.478 | 8.78 | 0.449 | 0.918 | -1.05 | 1.06 | -1.12 | 0.53 | 6.19 | 23.57 | 12 | -- | -- |
| 105.22 | 0.481 | 8.79 | 0.324 | 0.913 | -0.902 | 0.984 | -- | 0.511 | 6.37 | 23.4 | 11 | -- | -- |
| 105.92 | 0.479 | 8.78 | 0.456 | 0.92 | -1.03 | -- | -1.03 | 0.53 | 6.27 | 23.27 | 11 | -- | -- |
| 107.59 | 0.483 | 8.8 | 0.337 | 0.919 | -0.903 | -- | -- | 0.509 | 6.37 | 23.4 | 11 | -- | -- |
| 149.66 | 0.573 | 8.8 | 0.479 | -- | -0.984 | -- | -0.965 | 0.558 | -- | 23.19 | 7 | -- | -- |
| 115.98 | 0.505 | 8.76 | 0.511 | 0.909 | -- | 0.923 | -- | 0.639 | 6.93 | -- | -- | -- | -- |
| 118.18 | 0.509 | 8.77 | 0.528 | 0.911 | -- | -- | -- | 0.636 | 6.96 | -- | -- | -- | -- |
| 151.11 | 0.575 | 8.81 | 0.373 | -- | -0.869 | -- | -- | 0.538 | -- | 23.19 | 7 | -- | -- |
| 110.33 | 0.489 | 8.81 | -- | 0.926 | -1.03 | -- | -- | 0.454 | 6.26 | 23.46 | 11 | -- | -- |
| 161.78 | 0.594 | 8.78 | 0.547 | -- | -- | -- | -- | 0.653 | -- | -- | -- | -- | -- |
| 125.53 | 0.524 | 8.78 | -- | 0.917 | -- | -- | -- | 0.578 | 6.92 | -- | -- | -- | -- |
| 154.51 | 0.581 | 8.82 | -- | -- | -0.99 | -- | -- | 0.48 | -- | 23.3 | 9 | -- | -- |
| 169.67 | 0.608 | 8.8 | -- | -- | -- | -- | -- | 0.593 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.17 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 7 |
| 9 | 97.60 | temperature | 25 | 90 | < th | dose dependent | rect. | 14 | 16 |
| 51 | 99.26 | temperature | 20 | 30 | > th | dose dependent | rect. | 20 | 8 |
| 64 | 99.90 | temperature | 20 | 30 | > th | dose independent | rect. | 18 | 19 |
| 88 | 100.37 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 9 |
| 94 | 100.46 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 22 |
| 107 | 100.59 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 8 |
| 109 | 100.61 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 11 |
| 113 | 100.66 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 15 |
| 121 | 100.74 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 17 |
| 122 | 100.77 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 8 |
| 170 | 101.26 | radiation | 20 | 10 | < th | dose dependent | rect. | 3 | 15 |
| 179 | 101.34 | radiation | 20 | 10 | < th | dose dependent | sin | 3 | NA |
| 212 | 101.63 | temperature | 20 | 90 | > th | dose independent | rect. | 9 | 16 |
| 239 | 101.78 | temperature | 20 | 90 | > th | dose independent | rect. | 7 | 18 |
| 296 | 102.12 | radiation | 10 | 10 | < th | dose independent | rect. | 3 | 15 |
| 312 | 102.25 | temperature | 25 | 90 | < th | dose dependent | sin | 12 | NA |
| 368 | 102.58 | radiation | 10 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 389 | 102.67 | temperature | 20 | 10 | > th | dose independent | rect. | 7 | 19 |
| 457 | 103.04 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 687 | 103.98 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 4 |
| 706 | 104.07 | temperature | 10 | 270 | > th | dose dependent | rect. | 18 | 15 |
| 726 | 104.15 | radiation | 20 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 735 | 104.19 | radiation | 10 | 10 | < th | dose independent | sin | 2 | NA |
| 747 | 104.21 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 5 |
| 748 | 104.22 | atmosphere | 1010 | 270 | < th | dose independent | rect. | 17 | 8 |
| 751 | 104.23 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 23 | 8 |
| 763 | 104.29 | temperature | 30 | 270 | < th | dose independent | rect. | 6 | 19 |
| 776 | 104.30 | radiation | 20 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 779 | 104.33 | radiation | 10 | 10 | > th | dose independent | sin | 3 | NA |
| 790 | 104.36 | radiation | 10 | 10 | > th | dose independent | rect. | 15 | 23 |
| 803 | 104.40 | temperature | 25 | 270 | < th | dose independent | rect. | 6 | 5 |
| 828 | 104.50 | radiation | 40 | 720 | > th | dose dependent | rect. | 8 | 4 |
| 862 | 104.54 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 882 | 104.60 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 883 | 104.60 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 888 | 104.63 | wind | 1 | 270 | > th | dose independent | rect. | 23 | 8 |
| 895 | 104.65 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 903 | 104.66 | radiation | 30 | 10 | < th | dose dependent | rect. | 2 | 9 |
| 909 | 104.68 | radiation | 20 | 10 | < th | dose independent | rect. | 2 | 8 |
| 924 | 104.70 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 928 | 104.71 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 930 | 104.72 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 936 | 104.74 | radiation | 10 | 10 | > th | dose independent | rect. | 9 | 23 |
| 944 | 104.76 | radiation | 40 | 720 | > th | dose dependent | sin | 10 | NA |
| 948 | 104.77 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 3 |
| 963 | 104.79 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |