Os06g0647600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0647600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.64 | 0.525 | 9.09 | 1.71 | 0.854 | 1.58 | 0.441 | -1.14 | -0.000371 | 8.41 | 24.52 | 3134 | -- | -- |
| 126.91 | 0.525 | 9.08 | 1.47 | 0.792 | 1.63 | 0.371 | -- | -0.0266 | 8.47 | 24.5 | 3136 | -- | -- |
| 125.23 | 0.521 | 9.09 | 1.71 | 0.881 | 1.57 | -- | -1.09 | -0.0018 | 8.3 | 24.59 | 3047 | -- | -- |
| 126.88 | 0.525 | 9.1 | 1.42 | 0.818 | 1.49 | -- | -- | -0.0661 | 8.4 | 24.4 | 3129 | -- | -- |
| 153.65 | 0.577 | 9.11 | 1.77 | -- | 1.75 | -- | -1.17 | -0.0268 | -- | 24.9 | 3546 | -- | -- |
| 184.73 | 0.637 | 9.23 | 0.806 | 0.875 | -- | 0.352 | -- | -0.549 | 8.66 | -- | -- | -- | -- |
| 185.13 | 0.637 | 9.23 | 0.818 | 0.874 | -- | -- | -- | -0.548 | 8.67 | -- | -- | -- | -- |
| 155.98 | 0.582 | 9.18 | 1.48 | -- | 1.59 | -- | -- | -0.129 | -- | 24.7 | 3557 | -- | -- |
| 171.6 | 0.61 | 9.18 | -- | 0.934 | 1.22 | -- | -- | -0.273 | 7.9 | 24.8 | 2941 | -- | -- |
| 228.24 | 0.706 | 9.25 | 0.82 | -- | -- | -- | -- | -0.541 | -- | -- | -- | -- | -- |
| 202.76 | 0.666 | 9.25 | -- | 0.876 | -- | -- | -- | -0.64 | 8.61 | -- | -- | -- | -- |
| 200.43 | 0.659 | 9.2 | -- | -- | 1.19 | -- | -- | -0.359 | -- | 24.99 | 2099 | -- | -- |
| 245.97 | 0.732 | 9.27 | -- | -- | -- | -- | -- | -0.632 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 14 | 117.26 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 54 | 118.92 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 65 | 119.21 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 154 | 120.21 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 161 | 120.29 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 357 | 122.08 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 731 | 123.72 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 770 | 123.87 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 780 | 123.93 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 783 | 123.94 | temperature | 25 | 4320 | < th | dose independent | rect. | 13 | 15 |
| 952 | 124.67 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |