Os06g0645700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to HAF1.
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Os06g0645700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to HAF1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.09 | 0.231 | 10.1 | 1.01 | 0.474 | -0.284 | -0.28 | 2.57 | 0.249 | 7.71 | 20.23 | 1718 | -- | -- |
| 28.77 | 0.25 | 10.1 | 0.421 | 0.484 | -0.309 | -0.426 | -- | 0.136 | 7.51 | 15.64 | 16787 | -- | -- |
| 24.14 | 0.229 | 10 | 1.06 | 0.458 | -0.314 | -- | 2.78 | 0.271 | 7.77 | 20.87 | 1861 | -- | -- |
| 28.74 | 0.25 | 10.1 | 0.403 | 0.472 | -0.346 | -- | -- | 0.112 | 7.71 | 13.43 | 10204 | -- | -- |
| 33.98 | 0.271 | 10 | 1.49 | -- | -0.704 | -- | 4.75 | 0.36 | -- | 24.4 | 2055 | -- | -- |
| 30.44 | 0.259 | 10.2 | 0.207 | 0.494 | -- | -0.362 | -- | 0.00689 | 7.62 | -- | -- | -- | -- |
| 30.77 | 0.26 | 10.2 | 0.199 | 0.492 | -- | -- | -- | 0.00802 | 7.82 | -- | -- | -- | -- |
| 41.44 | 0.3 | 10.1 | 0.42 | -- | -0.39 | -- | -- | 0.134 | -- | 9.025 | 9384 | -- | -- |
| 31.48 | 0.261 | 10.1 | -- | 0.493 | -0.12 | -- | -- | 0.014 | 7.76 | 11.86 | 8999 | -- | -- |
| 43.9 | 0.31 | 10.2 | 0.205 | -- | -- | -- | -- | 0.0148 | -- | -- | -- | -- | -- |
| 31.82 | 0.264 | 10.2 | -- | 0.494 | -- | -- | -- | -0.0142 | 7.8 | -- | -- | -- | -- |
| 44.4 | 0.31 | 10.2 | -- | -- | -0.0948 | -- | -- | 0.00793 | -- | 25.5 | 6543 | -- | -- |
| 45.01 | 0.313 | 10.2 | -- | -- | -- | -- | -- | -0.00789 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.54 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 2 | 22.74 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 3 | 22.89 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 4 | 22.94 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 15 |
| 5 | 22.95 | wind | 3.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 7 | 22.99 | wind | 3.0 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 8 | 22.99 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 9 | 23.00 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 12 | 23.08 | wind | 3.0 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 14 | 23.09 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 18 |
| 16 | 23.14 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 19 | 23.18 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 20 | 23.19 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 24 | 23.21 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 26 | 23.22 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 27 | 23.23 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 29 | 23.24 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 30 | 23.25 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 31 | 23.25 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 33 | 23.25 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 34 | 23.26 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 44 | 23.26 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 18 |
| 51 | 23.30 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 55 | 23.31 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 65 | 23.33 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 67 | 23.34 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 69 | 23.35 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 73 | 23.35 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 74 | 23.35 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 5 |
| 75 | 23.36 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 7 |
| 78 | 23.37 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 79 | 23.37 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 5 | 6 |
| 81 | 23.37 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 19 | 10 |
| 85 | 23.38 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 128 | 23.41 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 147 | 23.41 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 17 | 18 |
| 148 | 23.41 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 153 | 23.43 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 17 | 18 |
| 170 | 23.44 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 171 | 23.44 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 16 |
| 175 | 23.45 | radiation | 1.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 176 | 23.45 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 201 | 23.45 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 6 |
| 219 | 23.46 | radiation | 1.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 246 | 23.46 | radiation | 1.0 | 43200 | < th | dose dependent | sin | 10 | NA |
| 266 | 23.46 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 13 |
| 314 | 23.48 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 371 | 23.50 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 395 | 23.51 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 2 | 7 |
| 401 | 23.51 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 5 | 13 |
| 402 | 23.51 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 5 | 13 |
| 409 | 23.51 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 11 | 6 |
| 423 | 23.53 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 493 | 23.54 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 12 | 5 |
| 532 | 23.55 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 13 |
| 536 | 23.56 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 553 | 23.57 | wind | 5.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 658 | 23.59 | radiation | 1.0 | 43200 | < th | dose independent | no | NA | NA |
| 710 | 23.59 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 718 | 23.60 | humidity | 80.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 720 | 23.60 | radiation | 1.0 | 43200 | > th | dose independent | no | NA | NA |
| 721 | 23.60 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 722 | 23.60 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 820 | 23.60 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 23 |
| 823 | 23.61 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 828 | 23.61 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 7 | 23 |
| 829 | 23.61 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 842 | 23.62 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 7 | 23 |
| 843 | 23.62 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 847 | 23.62 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 19 | 4 |
| 885 | 23.63 | radiation | 1.0 | 43200 | < th | dose dependent | no | NA | NA |
| 948 | 23.64 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 9 | 1 |