Os06g0641900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os06g0641900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 114.83 | 0.503 | 2.69 | 1.22 | 0.112 | -1.84 | -0.00725 | 18.5 | 0.025 | 10.3 | 29.6 | 255 | -- | -- |
| 119.21 | 0.512 | 2.81 | 0.153 | 0.0929 | 0.335 | -0.128 | -- | 0.00113 | 8.73 | 29.6 | 255 | -- | -- |
| 114.83 | 0.499 | 2.69 | 1.22 | 0.112 | -1.84 | -- | 18.5 | 0.0253 | 10.3 | 29.6 | 253 | -- | -- |
| 118.76 | 0.508 | 2.81 | 0.129 | 0.0764 | 0.372 | -- | -- | -0.0067 | 9.04 | 35.4 | 224 | -- | -- |
| 115.57 | 0.501 | 2.69 | 1.21 | -- | -1.92 | -- | 19.1 | 0.0194 | -- | 29.68 | 239 | -- | -- |
| 120.16 | 0.514 | 2.82 | 0.167 | 0.105 | -- | 0.093 | -- | -0.00905 | 11.9 | -- | -- | -- | -- |
| 120.18 | 0.513 | 2.82 | 0.17 | 0.106 | -- | -- | -- | -0.00903 | 11.3 | -- | -- | -- | -- |
| 117.92 | 0.506 | 2.82 | 0.151 | -- | 1.19 | -- | -- | -0.000536 | -- | 35.45 | 226 | -- | -- |
| 117.83 | 0.506 | 2.83 | -- | 0.0923 | 1.18 | -- | -- | -0.0188 | 10.2 | 35.45 | 226 | -- | -- |
| 120.89 | 0.514 | 2.82 | 0.167 | -- | -- | -- | -- | -0.01 | -- | -- | -- | -- | -- |
| 120.95 | 0.514 | 2.82 | -- | 0.104 | -- | -- | -- | -0.0279 | 11.2 | -- | -- | -- | -- |
| 118.52 | 0.507 | 2.82 | -- | -- | 1.21 | -- | -- | -0.0179 | -- | 35.45 | 226 | -- | -- |
| 121.62 | 0.515 | 2.82 | -- | -- | -- | -- | -- | -0.0286 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.49 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 16 | 105.84 | humidity | 60.0 | 90 | < th | dose independent | rect. | 9 | 1 |
| 31 | 107.36 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 32 | 107.36 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 33 | 108.31 | temperature | 25.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 36 | 109.33 | temperature | 20.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 39 | 109.33 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 49 | 110.32 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 59 | 110.74 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 19 | 5 |
| 61 | 110.77 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 21 | 2 |
| 62 | 110.77 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 63 | 110.78 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 19 | 5 |
| 71 | 110.83 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 89 | 111.02 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 19 | 6 |
| 90 | 111.02 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 19 | 6 |
| 91 | 111.03 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 17 | 1 |
| 97 | 111.07 | humidity | 70.0 | 30 | < th | dose independent | rect. | 17 | 1 |
| 274 | 112.10 | wind | 5.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 275 | 112.13 | wind | 5.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 287 | 112.24 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 347 | 112.45 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 6 | 4 |
| 349 | 112.48 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 6 | 2 |
| 372 | 112.58 | wind | 5.0 | 30 | > th | dose independent | rect. | 24 | 6 |
| 374 | 112.60 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 4 |
| 381 | 112.60 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 4 |
| 385 | 112.61 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 23 | 1 |
| 387 | 112.61 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 2 |
| 394 | 112.61 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 395 | 112.61 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 23 | 1 |
| 397 | 112.61 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 2 |
| 419 | 112.77 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 6 | 12 |
| 442 | 112.81 | wind | 1.0 | 30 | < th | dose independent | rect. | 17 | 1 |
| 453 | 112.81 | wind | 1.0 | 30 | < th | dose dependent | rect. | 17 | 1 |
| 464 | 112.83 | wind | 5.0 | 720 | < th | dose independent | rect. | 23 | 7 |
| 470 | 112.89 | radiation | 1.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 498 | 113.07 | wind | 5.0 | 720 | > th | dose independent | rect. | 22 | 5 |
| 501 | 113.10 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 7 | 1 |
| 506 | 113.11 | wind | 3.0 | 720 | > th | dose dependent | rect. | 23 | 4 |
| 516 | 113.16 | radiation | 1.0 | 90 | < th | dose independent | rect. | 6 | 5 |
| 559 | 113.34 | radiation | 30.0 | 90 | > th | dose independent | rect. | 15 | 19 |
| 617 | 113.42 | radiation | 40.0 | 10 | > th | dose independent | rect. | 12 | 23 |
| 662 | 113.53 | radiation | 20.0 | 10 | > th | dose independent | rect. | 15 | 20 |
| 668 | 113.56 | wind | 5.0 | 720 | < th | dose independent | rect. | 20 | 10 |
| 684 | 113.61 | temperature | 25.0 | 90 | > th | dose independent | rect. | 16 | 18 |
| 689 | 113.63 | wind | 3.0 | 720 | > th | dose dependent | rect. | 1 | 2 |
| 730 | 113.76 | temperature | 30.0 | 10 | > th | dose independent | rect. | 14 | 21 |
| 737 | 113.79 | radiation | 30.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 742 | 113.80 | radiation | 30.0 | 90 | > th | dose independent | sin | 12 | NA |
| 748 | 113.81 | wind | 5.0 | 10 | > th | dose independent | rect. | 22 | 6 |
| 752 | 113.82 | wind | 7.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 771 | 113.84 | radiation | 40.0 | 10 | > th | dose independent | sin | 11 | NA |
| 814 | 113.93 | wind | 5.0 | 720 | > th | dose independent | rect. | 1 | 2 |
| 816 | 113.94 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 819 | 113.94 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 859 | 114.01 | precipitation | 0.1 | 1440 | > th | dose independent | sin | 16 | NA |
| 869 | 114.02 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 3 | 7 |
| 878 | 114.04 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 24 | 10 |
| 881 | 114.05 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 23 |
| 888 | 114.06 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 16 | 16 |
| 912 | 114.09 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 15 | 20 |
| 929 | 114.16 | radiation | 20.0 | 90 | > th | dose independent | rect. | 7 | 3 |
| 930 | 114.16 | temperature | 25.0 | 90 | > th | dose independent | rect. | 24 | 10 |
| 931 | 114.16 | radiation | 10.0 | 90 | > th | dose dependent | sin | 11 | NA |
| 955 | 114.19 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 972 | 114.25 | radiation | 20.0 | 90 | > th | dose independent | rect. | 8 | 1 |