Os06g0641800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os06g0641800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.19 | 0.391 | 12.8 | -0.482 | 2.09 | -2.21 | 0.33 | -0.43 | -0.642 | 22.1 | 23.22 | 411 | -- | -- |
| 69.37 | 0.388 | 12.8 | -0.531 | 2.08 | -2.13 | 0.365 | -- | -0.654 | 22.1 | 23.28 | 418 | -- | -- |
| 69.57 | 0.388 | 12.8 | -0.484 | 2.08 | -2.25 | -- | -0.545 | -0.634 | 22.1 | 23.06 | 415 | -- | -- |
| 69.89 | 0.389 | 12.8 | -0.547 | 2.08 | -2.12 | -- | -- | -0.654 | 22.1 | 23.28 | 416 | -- | -- |
| 244.34 | 0.728 | 12.8 | -0.917 | -- | -3.13 | -- | 0.169 | -0.965 | -- | 29.5 | 739 | -- | -- |
| 124.38 | 0.523 | 12.7 | -0.0292 | 2.18 | -- | 0.333 | -- | -0.326 | 21.8 | -- | -- | -- | -- |
| 124.81 | 0.523 | 12.7 | -0.042 | 2.18 | -- | -- | -- | -0.326 | 21.8 | -- | -- | -- | -- |
| 244.32 | 0.728 | 12.8 | -0.882 | -- | -3.12 | -- | -- | -0.953 | -- | 29.5 | 739 | -- | -- |
| 76.92 | 0.408 | 12.7 | -- | 2.09 | -1.87 | -- | -- | -0.561 | 22 | 23.3 | 412 | -- | -- |
| 408.55 | 0.944 | 12.6 | -0.0196 | -- | -- | -- | -- | -0.328 | -- | -- | -- | -- | -- |
| 124.85 | 0.523 | 12.7 | -- | 2.18 | -- | -- | -- | -0.322 | 21.8 | -- | -- | -- | -- |
| 262.63 | 0.755 | 12.7 | -- | -- | -2.8 | -- | -- | -0.798 | -- | 29.6 | 731 | -- | -- |
| 408.56 | 0.943 | 12.6 | -- | -- | -- | -- | -- | -0.326 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.24 | temperature | 25 | 270 | < th | dose dependent | sin | 6 | NA |
| 2 | 70.45 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 16 |
| 6 | 70.78 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 8 | 71.00 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 22 | 71.74 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 20 |
| 25 | 71.79 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 18 |
| 57 | 72.35 | temperature | 20 | 270 | > th | dose independent | sin | 6 | NA |
| 72 | 72.73 | temperature | 20 | 270 | < th | dose independent | sin | 6 | NA |
| 73 | 72.74 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 22 |
| 91 | 73.10 | temperature | 15 | 270 | > th | dose dependent | sin | 7 | NA |
| 95 | 73.30 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 151 | 74.47 | temperature | 20 | 270 | < th | dose independent | rect. | 22 | 14 |
| 164 | 74.63 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 184 | 75.04 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 14 |
| 187 | 75.07 | temperature | 20 | 270 | < th | dose dependent | rect. | 23 | 11 |
| 212 | 75.38 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 248 | 75.72 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 269 | 75.92 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 304 | 76.29 | temperature | 15 | 720 | > th | dose dependent | rect. | 22 | 6 |
| 335 | 76.58 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 15 |
| 360 | 76.71 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 11 |
| 379 | 76.89 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 18 |
| 397 | 77.04 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 423 | 77.25 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 18 |
| 454 | 77.45 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 22 |
| 607 | 78.44 | temperature | 20 | 270 | < th | dose independent | rect. | 1 | 22 |
| 653 | 78.67 | temperature | 20 | 270 | < th | dose independent | rect. | 1 | 11 |
| 662 | 78.73 | temperature | 20 | 270 | < th | dose independent | rect. | 3 | 9 |
| 726 | 79.09 | temperature | 20 | 720 | < th | dose independent | sin | 10 | NA |
| 777 | 79.31 | temperature | 20 | 720 | > th | dose independent | sin | 10 | NA |
| 801 | 79.40 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 7 |
| 854 | 79.69 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 874 | 79.79 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 23 |
| 901 | 79.93 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 905 | 79.95 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 909 | 79.97 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 5 |
| 979 | 80.25 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 7 |
| 987 | 80.28 | temperature | 20 | 720 | < th | dose independent | rect. | 7 | 23 |
| 998 | 80.30 | temperature | 20 | 720 | > th | dose independent | rect. | 11 | 23 |