Os06g0641200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Elicitor-inducible cytochrome P450.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0641200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Elicitor-inducible cytochrome P450.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 167.06 | 0.607 | 5.74 | 2.75 | 0.266 | -2.66 | 0.842 | -1.02 | 0.212 | 2.55 | 10.25 | 4517 | -- | -- |
| 168.01 | 0.604 | 5.7 | 2.98 | 0.268 | -2.61 | 0.834 | -- | 0.273 | 2.55 | 10.44 | 4512 | -- | -- |
| 169.57 | 0.606 | 5.74 | 2.74 | 0.272 | -2.66 | -- | -1.01 | 0.21 | 2.77 | 8.754 | 4513 | -- | -- |
| 170.46 | 0.608 | 5.71 | 2.95 | 0.278 | -2.61 | -- | -- | 0.268 | 2.88 | 10.13 | 4478 | -- | -- |
| 173.45 | 0.613 | 5.74 | 2.75 | -- | -2.64 | -- | -0.959 | 0.213 | -- | 10.3 | 4638 | -- | -- |
| 289.12 | 0.797 | 5.82 | 1.76 | 0.194 | -- | 0.814 | -- | -0.236 | 2.81 | -- | -- | -- | -- |
| 291.39 | 0.799 | 5.82 | 1.75 | 0.199 | -- | -- | -- | -0.241 | 3.07 | -- | -- | -- | -- |
| 174.32 | 0.615 | 5.7 | 2.96 | -- | -2.59 | -- | -- | 0.273 | -- | 9.001 | 4639 | -- | -- |
| 330.34 | 0.851 | 5.81 | -- | 0.331 | -1.97 | -- | -- | -0.201 | 13.7 | 10.13 | 4478 | -- | -- |
| 293.64 | 0.801 | 5.82 | 1.75 | -- | -- | -- | -- | -0.236 | -- | -- | -- | -- | -- |
| 371.71 | 0.902 | 5.86 | -- | 0.233 | -- | -- | -- | -0.435 | 3.1 | -- | -- | -- | -- |
| 323.49 | 0.838 | 5.81 | -- | -- | -1.21 | -- | -- | -0.211 | -- | 21.88 | 1768 | -- | -- |
| 374.81 | 0.904 | 5.86 | -- | -- | -- | -- | -- | -0.43 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 163.95 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 2 | 164.55 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 4 | 164.67 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 7 | 165.42 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 8 | 165.62 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 10 |
| 10 | 165.69 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 11 | 165.73 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 10 |
| 28 | 166.22 | temperature | 10 | 4320 | > th | dose dependent | sin | 7 | NA |
| 39 | 166.29 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 15 |
| 68 | 166.56 | temperature | 30 | 4320 | < th | dose dependent | sin | 8 | NA |
| 73 | 166.60 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 18 |
| 133 | 166.89 | temperature | 30 | 4320 | < th | dose dependent | rect. | 15 | 17 |
| 151 | 166.93 | temperature | 30 | 4320 | < th | dose dependent | rect. | 13 | 19 |
| 211 | 167.11 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 212 | 167.11 | temperature | 30 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 335 | 167.42 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 465 | 167.70 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 569 | 167.92 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 21 |
| 592 | 167.97 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 23 |
| 701 | 168.25 | temperature | 30 | 4320 | < th | dose dependent | no | NA | NA |
| 768 | 168.43 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 795 | 168.53 | temperature | 30 | 4320 | < th | dose dependent | rect. | 5 | 23 |
| 887 | 168.98 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 2 |